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Fix #237: Upgrade Skesa container to 2.5.1 to fix ownership issue with /tmp #240

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merged 2 commits into from
Feb 9, 2024
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Fix #237: Upgrade Skesa container to 2.5.1 to fix ownership issue with /tmp #240

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Fix #237: Upgrade Skesa to 2.5.1 to fix ownership issue with /tmp
samuell Dec 13, 2023
87ca423
Add note in CHANGELOG
samuell Jan 29, 2024
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -16,6 +16,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### Changed

- Changed to use full file paths in include statements for better navigation in text editors.
- Upgraded the Skesa (container) to v2.5.1 to fix ownership issue with /tmp folder

## [0.4.0]

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2 changes: 1 addition & 1 deletion container/Makefile
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Expand Up @@ -52,7 +52,7 @@ URL_mykrobe := https://depot.galaxyproject.org/singularity/mykrobe:0.12.2--py39h
URL_perl_json := https://depot.galaxyproject.org/singularity/perl-json:4.10--pl5321hdfd78af_0
URL_quast := https://depot.galaxyproject.org/singularity/quast:5.2.0--py310pl5321hc8f18ef_2
URL_samtools := https://depot.galaxyproject.org/singularity/samtools:1.17--h00cdaf9_0
URL_skesa := https://depot.galaxyproject.org/singularity/skesa:2.4.0--he1c1bb9_0
URL_skesa := https://depot.galaxyproject.org/singularity/skesa:2.5.1--hdcf5f25_0
URL_snippy := https://depot.galaxyproject.org/singularity/snippy:4.6.0--hdfd78af_2
URL_sourmash := https://depot.galaxyproject.org/singularity/sourmash:4.8.2--hdfd78af_0
URL_spades := https://depot.galaxyproject.org/singularity/spades:3.15.5--h95f258a_1
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