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icgc-argo-workflows · Nov 14, 2022 · 9314c1d · 9314c1d
2 parents 4bdc92b + bb6b88e
commit 9314c1d
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Showing 4 changed files with 3 additions and 6 deletions.
diff --git a/.github/workflows/build-test-release.yml b/.github/workflows/build-test-release.yml
@@ -95,6 +95,7 @@ jobs:
 
     - name: Install Nextflow
       run: |
+        export NXF_VER=21.10.6
         wget --tries=10 -qO- https://get.nextflow.io | bash
         sudo chmod 755 nextflow
         sudo mv nextflow /usr/local/bin/

diff --git a/nextflow.config b/nextflow.config
@@ -1,7 +1,7 @@
 manifest {
     homePage = 'https://github.com/icgc-argo-workflows/icgc-argo-mutational-signatures'
     description = 'ICGC ARGO Mutational Signatures Workflow Packages'
-    nextflowVersion = '21.10.6'
+    nextflowVersion = '21.10'
 }
 
 docker {

diff --git a/signaturetoolslib/nextflow.config b/signaturetoolslib/nextflow.config
@@ -2,7 +2,3 @@ docker {
     enabled = true
     runOptions = '-u \$(id -u):\$(id -g)'
 }
-
-manifest {
-nextflowVersion = '21.10.6'
-}
diff --git a/signaturetoolslib/tests/expected/test_assignments.json b/signaturetoolslib/tests/expected/test_assignments.json
@@ -1,5 +1,5 @@
 {
-	"fitAlgorithm": Fit,
+	"fitAlgorithm": "Fit",
 	"nsamples": 10,
 	"nsignatures": 30,
 	"nchannels": 96,