noiseVarianceHomogeneous -> errorVarianceHomogeneous + definition

incf-nidash · Oct 3, 2014 · d838a5f · d838a5f
1 parent 929d1a6
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Showing 7 changed files with 42 additions and 40 deletions.
diff --git a/nidm/nidm-results/fsl/example001/fsl_nidm.provn b/nidm/nidm-results/fsl/example001/fsl_nidm.provn
@@ -279,7 +279,7 @@ document
     entity(niiri:noise_model_id,
       [prov:type = 'nidm:NoiseModel',
       nidm:hasNoiseDistribution = 'nidm:GaussianDistribution',
-      nidm:noiseVarianceHomogeneous = "true" %%xsd:boolean,
+      nidm:errorVarianceHomogeneous = "true" %%xsd:boolean,
       nidm:varianceSpatialModel = 'nidm:SpatiallyLocal',
       nidm:hasNoiseDependence = 'nidm:IndependentNoise',
       nidm:dependenceSpatialModel = 'nidm:SpatiallyLocal'])

diff --git a/nidm/nidm-results/fsl/fsl_results.provn b/nidm/nidm-results/fsl/fsl_results.provn
@@ -167,7 +167,7 @@ document
     entity(niiri:noise_model_id,
       [prov:type = 'nidm:NoiseModel',
       nidm:hasNoiseDistribution = 'nidm:GaussianDistribution',
-      nidm:noiseVarianceHomogeneous = "true" %%xsd:boolean,
+      nidm:errorVarianceHomogeneous = "true" %%xsd:boolean,
       nidm:varianceSpatialModel = 'nidm:SpatiallyLocal',
       nidm:hasNoiseDependence = 'nidm:IndependentNoise',
       nidm:dependenceSpatialModel = 'nidm:SpatiallyLocal'])

diff --git a/nidm/nidm-results/spm/example001/example001_spm_results.provn b/nidm/nidm-results/spm/example001/example001_spm_results.provn
@@ -174,7 +174,7 @@ document
     entity(niiri:noise_model_id,
       [prov:type = 'nidm:NoiseModel',
       nidm:hasNoiseDistribution = 'nidm:GaussianDistribution',
-      nidm:noiseVarianceHomogeneous = "true" %%xsd:boolean,
+      nidm:errorVarianceHomogeneous = "true" %%xsd:boolean,
       nidm:varianceSpatialModel = 'nidm:SpatiallyLocal',
       nidm:hasNoiseDependence = 'nidm:IndependentNoise',
       nidm:dependenceSpatialModel = 'nidm:SpatiallyLocal'])

diff --git a/nidm/nidm-results/spm/example002/spm_results_2contrasts.provn b/nidm/nidm-results/spm/example002/spm_results_2contrasts.provn
@@ -159,7 +159,7 @@ document
   entity(niiri:noise_model_id,
       [prov:type = 'nidm:NoiseModel',
       nidm:hasNoiseDistribution = 'nidm:GaussianDistribution',
-      nidm:noiseVarianceHomogeneous = "true" %%xsd:boolean,
+      nidm:errorVarianceHomogeneous = "true" %%xsd:boolean,
       nidm:varianceSpatialModel = 'nidm:SpatiallyLocal',
       nidm:hasNoiseDependence = 'nidm:IndependentNoise',
       nidm:dependenceSpatialModel = 'nidm:SpatiallyLocal'])

diff --git a/nidm/nidm-results/spm/example003/spm_results_conjunction.provn b/nidm/nidm-results/spm/example003/spm_results_conjunction.provn
@@ -163,7 +163,7 @@ document
   entity(niiri:noise_model_id,
       [prov:type = 'nidm:NoiseModel',
       nidm:hasNoiseDistribution = 'nidm:GaussianDistribution',
-      nidm:noiseVarianceHomogeneous = "true" %%xsd:boolean,
+      nidm:errorVarianceHomogeneous = "true" %%xsd:boolean,
       nidm:varianceSpatialModel = 'nidm:SpatiallyLocal',
       nidm:hasNoiseDependence = 'nidm:IndependentNoise',
       nidm:dependenceSpatialModel = 'nidm:SpatiallyLocal'])

diff --git a/nidm/nidm-results/spm/spm_results.provn b/nidm/nidm-results/spm/spm_results.provn
@@ -233,7 +233,7 @@ document
     entity(niiri:noise_model_id,
       [prov:type = 'nidm:NoiseModel',
       nidm:hasNoiseDistribution = 'nidm:GaussianDistribution',
-      nidm:noiseVarianceHomogeneous = "true" %%xsd:boolean,
+      nidm:errorVarianceHomogeneous = "true" %%xsd:boolean,
       nidm:varianceSpatialModel = 'nidm:SpatiallyLocal',
       nidm:hasNoiseDependence = 'nidm:IndependentNoise',
       nidm:dependenceSpatialModel = 'nidm:SpatiallyLocal'])

diff --git a/nidm/nidm-results/terms/nidm-results.owl b/nidm/nidm-results/terms/nidm-results.owl
@@ -661,6 +661,20 @@ nidm:errorDegreesOfFreedom rdf:type owl:DatatypeProperty ;
 
 
 
+###  http://www.incf.org/ns/nidash/nidm#errorVarianceHomogeneous
+
+nidm:errorVarianceHomogeneous rdf:type owl:DatatypeProperty ;
+
+                              prov:definition "A boolean value regarding how the variance of the error is modelled during parameter estimation; TRUE for constant variance over all observations in the model, FALSE for heterogeneous variance." ;
+
+                              nidm:curationStatus "nidm:PendingFinalVetting" ;
+
+                              rdfs:domain nidm:NoiseModel ;
+
+                              rdfs:range xsd:boolean .
+
+
+
 ###  http://www.incf.org/ns/nidash/nidm#filename
 
 nidm:filename rdf:type owl:DatatypeProperty ;
@@ -755,18 +769,6 @@ nidm:noiseFWHM rdf:type owl:DatatypeProperty ;
 
 
 
-###  http://www.incf.org/ns/nidash/nidm#noiseVarianceHomogeneous
-
-nidm:noiseVarianceHomogeneous rdf:type owl:DatatypeProperty ;
-
-                              prov:definition "FIXME" ;
-
-                              rdfs:domain nidm:NoiseModel ;
-
-                              rdfs:range xsd:boolean .
-
-
-
 ###  http://www.incf.org/ns/nidash/nidm#numberOfClusters
 
 nidm:numberOfClusters rdf:type owl:DatatypeProperty ;
@@ -2424,16 +2426,6 @@ nidm:Peak rdf:type owl:Class ;
 
 
 
-###  http://www.incf.org/ns/nidash/nidm#PoissonDistribution
-
-nidm:PoissonDistribution rdf:type owl:Class ;
-
-                         rdfs:subClassOf nidm:NoiseDistribution ;
-
-                         owl:sameAs "http://purl.obolibrary.org/obo/STATO_0000051"^^xsd:anyURI .
-
-
-
 ###  http://www.incf.org/ns/nidash/nidm#PendingFinalVetting
 
 nidm:PendingFinalVetting rdf:type owl:Class ;
@@ -2446,6 +2438,16 @@ nidm:PendingFinalVetting rdf:type owl:Class ;
 
 
 
+###  http://www.incf.org/ns/nidash/nidm#PoissonDistribution
+
+nidm:PoissonDistribution rdf:type owl:Class ;
+
+                         rdfs:subClassOf nidm:NoiseDistribution ;
+
+                         owl:sameAs "http://purl.obolibrary.org/obo/STATO_0000051"^^xsd:anyURI .
+
+
+
 ###  http://www.incf.org/ns/nidash/nidm#ReadyForRelease
 
 nidm:ReadyForRelease rdf:type owl:Class ;
@@ -2755,18 +2757,6 @@ nidm:TwoTailedTest rdf:type owl:Class ;
 
 
 
-###  http://www.incf.org/ns/nidash/nidm#WeightedLeastSquares
-
-nidm:WeightedLeastSquares rdf:type owl:Class ;
-
-                          rdfs:subClassOf nidm:EstimationMethod ;
-
-                          rdfs:comment "WLS (heteroscedasticity accounted for, but no dependence)" ;
-
-                          prov:definition "FIXME" .
-
-
-
 ###  http://www.incf.org/ns/nidash/nidm#Uncurated
 
 nidm:Uncurated rdf:type owl:Class ;
@@ -2779,6 +2769,18 @@ nidm:Uncurated rdf:type owl:Class ;
 
 
 
+###  http://www.incf.org/ns/nidash/nidm#WeightedLeastSquares
+
+nidm:WeightedLeastSquares rdf:type owl:Class ;
+
+                          rdfs:subClassOf nidm:EstimationMethod ;
+
+                          rdfs:comment "WLS (heteroscedasticity accounted for, but no dependence)" ;
+
+                          prov:definition "FIXME" .
+
+
+
 ###  http://www.incf.org/ns/nidash/nidm#WorldCoordinateSystem
 
 nidm:WorldCoordinateSystem rdf:type owl:Class ;