Revert "Feature/company license (oncokb#1164)"

This reverts commit bc7bb8a.

.jhipster/Company.json

@@ -42,11 +42,6 @@
     {
       "fieldName": "legalContact",
       "fieldType": "String"
-    },
-    {
-      "fieldName": "additionalInfo",
-      "fieldType": "byte[]",
-      "fieldTypeBlobContent": "text"
     }
   ],
   "relationships": [

jhipster-jdl.jdl

@@ -40,7 +40,6 @@ entity Company {
     licenseStatus LicenseStatus required,
     businessContact String,
     legalContact String,
-    additionalInfo TextBlob
 }
 
 entity CompanyDomain {

screenshot-test/data/api-companies.json

@@ -10,18 +10,7 @@
     "businessContact": "Representative",
     "legalContact": "override orchid reboot",
     "companyDomains": ["oncokb.org"],
-    "numberOfUsers": 0,
-    "additionalInfo": {
-      "license": {
-        "termination": {
-          "date": "2025-09-21",
-          "notes": "notes",
-          "notificationDays": 3433
-        },
-        "autoRenewal": false,
-        "activation": "2024-09-28"
-      }
-    }
+    "numberOfUsers": 0
   },
   {
     "id": 2,
@@ -34,17 +23,6 @@
     "businessContact": "Steel Configuration Designer",
     "legalContact": "system engine Australian Dollar",
     "companyDomains": ["mskcc.org"],
-    "numberOfUsers": 3,
-    "additionalInfo": {
-      "license": {
-        "termination": {
-          "date": "2025-09-21",
-          "notes": "notes",
-          "notificationDays": 3433
-        },
-        "autoRenewal": false,
-        "activation": "2024-09-28"
-      }
-    }
+    "numberOfUsers": 3
   }
 ]

screenshot-test/data/api-company-details.json

@@ -9,16 +9,5 @@
   "businessContact": "Representative",
   "legalContact": "override orchid reboot",
   "companyDomains": ["oncokb.org"],
-  "numberOfUsers": 0,
-  "additionalInfo": {
-    "license": {
-      "termination": {
-        "date": "2024-09-21",
-        "notes": "notes",
-        "notificationDays": 3433
-      },
-      "autoRenewal": false,
-      "activation": "2024-09-28"
-    }
-  }
+  "numberOfUsers": 0
 }

src/main/java/org/mskcc/cbio/oncokb/config/application/ApplicationProperties.java

@@ -188,4 +188,5 @@ public RecaptchaProperties getRecaptcha() {
     public void setRecaptcha(RecaptchaProperties recaptcha) {
         this.recaptcha = recaptcha;
     }
+
 }

src/main/java/org/mskcc/cbio/oncokb/domain/Company.java

@@ -66,10 +66,6 @@ public class Company implements Serializable {
     @Column(name = "legal_contact", length = 255)
     private String legalContact;
 
-    @Lob
-    @Column(name = "additional_info")
-    private String additionalInfo;
-
     @ManyToMany(fetch = FetchType.EAGER, cascade = {CascadeType.PERSIST, CascadeType.MERGE})
     @JoinTable(name = "company_company_domain",
                joinColumns = @JoinColumn(name = "company_id", referencedColumnName = "id"),
@@ -189,19 +185,6 @@ public void setLegalContact(String legalContact) {
         this.legalContact = legalContact;
     }
 
-    public String getAdditionalInfo() {
-        return additionalInfo;
-    }
-
-    public Company additionalInfo(String additionalInfo) {
-        this.additionalInfo = additionalInfo;
-        return this;
-    }
-
-    public void setAdditionalInfo(String additionalInfo) {
-        this.additionalInfo = additionalInfo;
-    }
-
     public Set<CompanyDomain> getCompanyDomains() {
         return companyDomains;
     }
@@ -257,7 +240,6 @@ public String toString() {
             ", licenseStatus='" + getLicenseStatus() + "'" +
             ", businessContact='" + getBusinessContact() + "'" +
             ", legalContact='" + getLegalContact() + "'" +
-            ", additionalInfo='" + getAdditionalInfo() + "'" +
             "}";
     }
 }

src/main/java/org/mskcc/cbio/oncokb/domain/enumeration/MailType.java

@@ -119,9 +119,6 @@ public enum MailType {
     , LIST_OF_UNAPPROVED_USERS(new MailTypeBuilder()
         .templateName("listOfUnapprovedUsers")
         .description("List of unapproved users"))
-    , TERMINATION_NOTIFICATION_EMAIL(new MailTypeBuilder()
-        .templateName("terminationNotificationEmail")
-        .description("Notifies admins about companies with licenses about to expire"))
     , TEST(new MailTypeBuilder()
         .templateName("testEmail")
         .description("Test"))

src/main/java/org/mskcc/cbio/oncokb/repository/CompanyRepository.java

@@ -24,7 +24,4 @@ public interface CompanyRepository extends JpaRepository<Company, Long> {
 
     @Cacheable(cacheResolver = "companyCacheResolver")
     Optional<Company> findOneByNameIgnoreCase(String name);
-
-    @Query("select c from Company c where c.id in ?1")
-    List<Company> findCompaniesByIds(List<Long> ids);
 }

src/main/java/org/mskcc/cbio/oncokb/service/CompanyService.java

@@ -1,6 +1,5 @@
 package org.mskcc.cbio.oncokb.service;
 
-import org.mskcc.cbio.oncokb.domain.Company;
 import org.mskcc.cbio.oncokb.domain.enumeration.LicenseStatus;
 import org.mskcc.cbio.oncokb.service.dto.CompanyDTO;
 import org.mskcc.cbio.oncokb.web.rest.vm.CompanyVM;
@@ -59,7 +58,4 @@ public interface CompanyService {
      * @param id the id of the entity.
      */
     void delete(Long id);
-
-
-    List<CompanyDTO> findCompaniesByIds(List<Long> ids);
 }

src/main/java/org/mskcc/cbio/oncokb/service/MailService.java

@@ -10,7 +10,6 @@
 import org.mskcc.cbio.oncokb.domain.Company;
 import org.mskcc.cbio.oncokb.domain.UserMessagePair;
 import org.mskcc.cbio.oncokb.domain.enumeration.MailType;
-import org.mskcc.cbio.oncokb.service.dto.TerminationEmailDTO;
 import org.mskcc.cbio.oncokb.service.dto.UserDTO;
 import org.mskcc.cbio.oncokb.service.dto.UserMailsDTO;
 import org.mskcc.cbio.oncokb.web.rest.vm.ExposedToken;
@@ -86,20 +85,6 @@ private UnknownMailTypeException() {
         }
     }
 
-    public void sendEmail(TerminationEmailDTO dto) throws MessagingException {
-        log.debug("Send email to company ID '{}' with subject '{}' and content={}",
-            dto.getCompanyId(),  dto.getSubject(), dto.getContent());
-
-        MimeMessage mimeMessage = javaMailSender.createMimeMessage();
-        MimeMessageHelper message = new MimeMessageHelper(mimeMessage, false, StandardCharsets.UTF_8.name());
-        message.setFrom(dto.getFrom());
-        message.setBcc(dto.getBcc().split(";"));
-        message.setCc(dto.getCc().split(";"));
-        message.setSubject(dto.getSubject());
-        message.setText(dto.getContent(), false);
-        javaMailSender.send(mimeMessage);
-    }
-
     @Async
     public void sendEmail(String to, String from, String cc, String subject, String content, List<String> attachmentFilesNames, boolean isMultipart, boolean isHtml) throws MessagingException {
         log.debug("Send email[multipart '{}' and html '{}'] to '{}' with subject '{}' and content={}",
@@ -251,21 +236,6 @@ public void sendEmailFromTemplate(UserDTO user, MailType mailType, String subjec
         }
     }
 
-    public void sendInternalEmailFromTemplate(MailType mailType, String subject, String to, Context additionalContext) {
-        Context context = new Context(Locale.ENGLISH);
-
-        if (additionalContext != null)
-            additionalContext.getVariableNames().forEach(name -> context.setVariable(name, additionalContext.getVariable(name)));
-
-        String from = jHipsterProperties.getMail().getFrom();
-        String content = templateEngine.process("mail/" + mailType.getTemplateName(), context);
-        try {
-            sendEmail(to, from, null, subject, content, null, false, true);
-        } catch (MailException | MessagingException e) {
-            log.warn("Internal email could not be sent to '{}'", to, e);
-        }
-    }
-
     @Async
     public void sendActivationEmail(UserDTO user) {
         log.debug("Sending activation email to '{}'", user.getEmail());

src/main/java/org/mskcc/cbio/oncokb/service/dto/CompanyDTO.java

@@ -7,15 +7,14 @@
 import javax.persistence.Lob;
 import org.mskcc.cbio.oncokb.domain.enumeration.CompanyType;
 import org.mskcc.cbio.oncokb.domain.enumeration.LicenseType;
-import org.mskcc.cbio.oncokb.service.dto.companyadditionalinfo.CompanyAdditionalInfoDTO;
 import org.mskcc.cbio.oncokb.domain.enumeration.LicenseModel;
 import org.mskcc.cbio.oncokb.domain.enumeration.LicenseStatus;
 
 /**
  * A DTO for the {@link org.mskcc.cbio.oncokb.domain.Company} entity.
  */
 public class CompanyDTO implements Serializable {
-
+    
     private Long id;
 
     @NotNull
@@ -43,11 +42,8 @@ public class CompanyDTO implements Serializable {
     @NotEmpty
     private Set<String> companyDomains = new HashSet<>();
 
-    @Lob
-    private CompanyAdditionalInfoDTO additionalInfo;
-
     private Integer numberOfUsers;
-
+    
     public Long getId() {
         return id;
     }
@@ -128,14 +124,6 @@ public void setCompanyDomains(Set<String> companyDomains) {
         this.companyDomains = companyDomains;
     }
 
-    public CompanyAdditionalInfoDTO getAdditionalInfo() {
-        return additionalInfo;
-    }
-
-    public void setAdditionalInfo(CompanyAdditionalInfoDTO additionalInfo) {
-        this.additionalInfo = additionalInfo;
-    }
-
     public Integer getNumberOfUsers() {
         return this.numberOfUsers;
     }
@@ -174,7 +162,6 @@ public String toString() {
             ", licenseStatus='" + getLicenseStatus() + "'" +
             ", businessContact='" + getBusinessContact() + "'" +
             ", legalContact='" + getLegalContact() + "'" +
-            ", additionalInfo='" + getAdditionalInfo() + "'" +
             ", companyDomains='" + getCompanyDomains() + "'" +
             ", numberOfUsers='" + getNumberOfUsers() + "'" +
             "}";