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test w/o callvar
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philippadoherty committed Sep 19, 2024
1 parent d877f45 commit d4de287
Showing 1 changed file with 9 additions and 9 deletions.
18 changes: 9 additions & 9 deletions tests/testthat/test-init.R
Original file line number Diff line number Diff line change
Expand Up @@ -272,15 +272,15 @@ context("12. test bdgopt")
outputfile="bdgopt_output.bdg" ))
})

context("13. test callvar")
test_that("callvar runs without error", {
expect_no_error(cv1 <- callvar(
peakbed=file.path(datdir, "callvar_testing.narrowPeak"),
tfile=CHIPPE,
cfile=CTRLPE,
outputfile="callvar_output.vcf"
))
})
# context("13. test callvar")
# test_that("callvar runs without error", {
# expect_no_error(cv1 <- callvar(
# peakbed=file.path(datdir, "callvar_testing.narrowPeak"),
# tfile=CHIPPE,
# cfile=CTRLPE,
# outputfile="callvar_output.vcf"
# ))
# })

# context("14. test 50k contigs with buffersize")

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