Display the updated notebook after each gh-workflow run #43

	name: Run workflow

	on:
	push:
	branches: [ main ]
	pull_request:
	types: [labeled, opened, synchronize, reopened]
	workflow_call:
	permissions:
	contents: write

	jobs:
	run_workflow:
	if: \|
	github.event_name == 'push' \|\|
	(github.event_name == 'pull_request' && contains(github.event.pull_request.labels.*.name, 'run_workflow' ) &&
	github.event.actor.login != 'ci')

	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	with:
	fetch-depth: 0
	- name: Setup environment
	uses: pyiron/actions/[email protected]
	with:
	python-version: '3.11'
	env-files: .ci_support/environment.yml
	local-code-directory: ''
	use-cache: 'true'
	miniforge-channels: conda-forge
	pip-install-versioneer: 'false'
	no-build-isolation: 'false'
	- name: Add papermill and jupyter
	shell: bash -l {0}
	run: mamba install -n my-env jupyter papermill
	- name: Execute workflow
	shell: bash -l {0}
	run: \|
	papermill workflow.ipynb workflow-out.ipynb -k python3
	mkdir ci_output
	date +%s > ci_output/timestamp.txt
	mv workflow-out.ipynb ci_output/
	- name: Upload CI output files as artifact
	uses: actions/upload-artifact@v4
	with:
	name: ci_output
	path: ./ci_output/*
	- name: push ./ci_output
	shell: bash -l {0}
	run: \|
	git config --get user.name
	git config user.name "ci"
	git config user.email "[email protected]"
	git add ci_output/*
	git commit -m "push updated notebook to './ci_output/workflow-out.ipynb'"
	git push

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