Implement DOT based workflow skeleton creator #52

	name: Run workflow

	on:
	push:
	branches: [ main ]
	pull_request:
	types: [labeled, opened, synchronize, reopened]
	workflow_call:

	jobs:
	run_workflow:
	if: \|
	github.event_name == 'push' \|\|
	( github.event_name == 'pull_request' && contains(github.event.pull_request.labels.*.name, 'run_workflow' ))
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	- name: Setup environment
	uses: pyiron/actions/[email protected]
	with:
	python-version: '3.11'
	env-files: .ci_support/environment.yml
	local-code-directory: ''
	use-cache: 'true'
	miniforge-channels: conda-forge
	pip-install-versioneer: 'false'
	no-build-isolation: 'false'
	- name: Add papermill and jupyter
	shell: bash -l {0}
	run: mamba install -n my-env jupyter papermill
	- name: Execute workflow
	shell: bash -l {0}
	run: papermill workflow.ipynb workflow-out.ipynb -k python3
	- name: Upload updated notebook as artifact
	uses: actions/upload-artifact@v4
	with:
	name: workflow-out.ipynb
	path: ./workflow-out.ipynb

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