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nadeemlab · Apr 14, 2024 · f02b01d · f02b01d
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 <p align="center">
-<img src="docs/image_assets/SPT_logo_blue_on_transparent.png" width="400">
+<img src="docs/image_assets/SPT_logo_blue_on_transparent.png" width="400"/>
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+<a href="https://github.com/nadeemlab/SPT/raw/main/docs/image_assets/main_diagram_cropped.svg">
+<img src="docs/image_assets/diagram_low_res.png"/>
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-![diagram](docs/image_assets/main_diagram_cropped.svg)
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 The Spatial Profiling Toolbox (SPT) is a lightweight deployment framework for cell analysis computation in the context of histopathology. The pipelines are orchestrated with [Nextflow](https://www.nextflow.io/) and support [Singularity](https://sylabs.io/guides/latest/user-guide/)/[Docker](https://hub.docker.com/r/nadeemlab/spt) containerization.
diff --git a/docs/image_assets/diagram_low_res.png b/docs/image_assets/diagram_low_res.png