added validation code for narrowPeak, broadPeak files #23
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
The issue I ran into with #22 was that my files were not properly formatted narrowPeak files. The error message I got wasn't immediately clear, so I made this PR to do some validation on narrowPeak and broadPeak samples input.
Have a look, it should be pretty straightforward to use. I didn't want to create a new module for validation code, so I stuck this into
utility.py
. No new dependencies added.