Releases: ncborcherding/escape
Releases · ncborcherding/escape
v2.2.3
v2.2.1
escape VERSION 2.2.1
UNDERLYING CHANGES
- update handling of v5 Seurat versus <v5 Seurat Objects
- added mean and median visualization for
heatmapEnrichment()
- update
densityEnrichment()
GSVA function pull - Parallelization of
performNormalization()
- Refactor of
getGeneSets()
to prevent issues with m_df error. - fixed
performNormalization()
errors when input.data was a matrix, now requires single-cell object and enrichment data - passing parallel processing properly to
runEscape()
function. - ordering by mean values no longer changes the color order
- add explicit BPPARAM argument to
runEscape()
andescape.matrix()
- added additional details in
runEscape()
andescape.matrix()
for make.positive. - removed plotting of
splitEnrichment()
for group.by = NULL - separated AUC calculation to rankings and AUC, this was only method found to get consistent scores.