hyppo v0.2.0
Note: People with a "+" by their names contributed a patch for the first time.
Release date: 08 February 2021
Supports: Python 3.6+.
New features
- Added restricted permutation functionality for Dcorr
- Kernel functions now wrap scikit-learn and support keyword arguments
hyppo.ksample.Energy
hyppo.ksample.DISCO
hyppo.ksample.MMD
- Fast 1D exact Dcorr
O(n log n)
hyppo.ksample.Hotelling
hyppo.ksample.MANOVA
hyppo.independence.MaxMargin
Bug Fixes
- Fixed error check for k-sample tests to be between samples instead of within
- Time series doesn't clip negative values
- Fix docs not building on netlify
- Fix p-value calculations for permutation tests to be more in line with the literature
- Fix
hyppo.independence.Dcorr
andhyppo.independence.Hsic
incorrect stats
Documentation
- Update badges and README to FIRM guidelines
- Incorrect equation in :meth:
hyppo.tools.circle
docstring - Update README to be in line with scikit-learn
- Remove literature reference section in docstrings, add links to papers
- Add docstrings for :mod:
hyppo.tools
functions - Add
overview.py
file for an overview of the package - Add tutorials folder, rewrite so it is more user-friendly (port independence, k-sample, time series)
- Add examples folder with more information about unique features
- Move to
sphinx-gallery
instead of nbconvert - Use
automodule
instead ofautoclass
- Make clear about the package requirements and docs requirements
- Make
changelog
into a single file - Add external links to neurodata and code of conduct
- Add citing page to cite the package papers
- Make index page a clone of README
- Update MakeFile for more options
- Add intersphinx mapping with links externally (
numpy
,scipy
, etc.) and internally - Add docs for statistic function
- Add discriminability tutorial
Maintenance
- Fix typos in warning commits
- Updated tests to precalculate distance matrix
- Moved from Travis CI to Circle CI
- Raise base
requirements.txt
to fix failing tests on CircleCI - Add code coverage config files
- Add documentation folders and files to
.gitignore
- Remove
reps
warning test - Cache numba after first call to speed up runs
- Fix netlify config to new doc build structure
Authors
- Sambit Panda
- Vivek Gopalakrishnan +
- Ronak Mehta
- Ronan Perry +