Update container

neurogenomics · Jul 4, 2024 · 51e9d29 · 51e9d29
1 parent 4927c30
commit 51e9d29
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Showing 2 changed files with 4 additions and 6 deletions.
diff --git a/.github/workflows/rworkflows.yml b/.github/workflows/rworkflows.yml
@@ -25,13 +25,9 @@ jobs:
         - os: ubuntu-latest
           bioc: devel
           r: auto
-          cont: docker.io/tomrrr1/bioconductor_meme:latest # Custom image
+          cont: docker.io/hdasht/bioc-meme:meme5.5.5 # Custom image
           rspm: https://packagemanager.rstudio.com/cran/__linux__/focal/release
     steps:
-    - name: Set MEME_BIN environment variable
-      run: echo "MEME_BIN=/meme/bin" >> $GITHUB_ENV
-    - name: Check MEME_BIN
-      run: echo $MEME_BIN
     - uses: HDash/rworkflows@master
       with:
         run_bioccheck: ${{ true }}

diff --git a/vignettes/docker.Rmd b/vignettes/docker.Rmd
@@ -9,7 +9,7 @@ output:
     md_extensions: -autolink_bare_uris
 params:
   cont:
-    value: ghcr.io/neurogenomics/MotifPeeker
+    value: ghcr.io/neurogenomics/motifpeeker
   docker_registry:
     value: ghcr.io
   docker_org:
@@ -70,6 +70,8 @@ docker run \
     `r cont`
 ```  
 
+Access RStudio by visiting [http://localhost:8900/](http://localhost:8900/).
+
 ### NOTES
 
 * Make sure to replace `<your_password>` above with whatever you want your