nf-core linting

Added ability to auto-create samplesheet for nf-core/phageannotator #1489

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Run time

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Job	Run time
nf-core	1m 52s
nf-core	1m 46s
PythonBlack	11s
PythonBlack	11s
EditorConfig	5s
EditorConfig	6s
Prettier	8s
Prettier	6s
	4m 25s