Fixed test_nothing nf-test

nf-core · Dec 13, 2023 · 490260b · 490260b
1 parent 8ecb7ed
commit 490260b
Showing 1 changed file with 20 additions and 0 deletions.
diff --git a/tests/test_nothing.nf.test b/tests/test_nothing.nf.test
@@ -10,6 +10,26 @@ nextflow_pipeline {
         when {
             params {
                 outdir                  = "$outputDir"
+                input                   = 'https://raw.githubusercontent.com/nf-core/test-datasets/mag/samplesheets/samplesheet.csv'
+                centrifuge_db           = null
+                kraken2_db              = null
+                keep_phix               = true
+                skip_krona              = true
+                skip_clipping           = true
+                skip_adapter_trimming   = true
+                skip_spades             = true
+                skip_spadeshybrid       = true
+                skip_megahit            = true
+                skip_quast              = true
+                skip_prodigal           = true
+                skip_binning            = true
+                skip_metabat2           = true
+                skip_maxbin2            = true
+                skip_concoct            = true
+                skip_prokka             = true
+                skip_binqc              = true
+                skip_gtdbtk             = true
+                skip_concoct            = true
             }
         }