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@ewels ewels released this 17 Dec 00:40
· 557 commits to master since this release
2.3.0
93bc581
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Learn about vigilant mode.

Pipeline Updates

  • ⚙️ Dramatically increase the default process time config requests for Bismark and bwa meth alignment
  • ✨ Add a tower.yml file to enable Reports in Nextflow Tower
  • 🤖 GitHub Actions CI - download the test data prior to running tests

Bug fixes & refactoring

  • 🧹 Refactor genome indices preparation into a separate workflow
  • 🧹 Refactor subworkflow logic out of alignment subworkflows, for later sharing
  • 🐛 Fix a bug with using a local genome reference FASTA file
  • 🐛 Fix a bunch of problems in the CI tests using nf-test (#279)
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