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Update Prokka to take compressed input && tidy module script #1682

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Update Prokka to take compressed input && tidy module script

Update Prokka to take compressed input && tidy module script #1682

Run time

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Job Run time
pre-commit
15s
nf-core-changes
5s
nf-core lint modules (prokka)
2m 3s
confirm-pass
1s
2m 24s