chore: Fix config selectors

nf-core · Dec 21, 2024 · e9d94ba · e9d94ba
1 parent 2d19d95
commit e9d94ba
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Showing 3 changed files with 4 additions and 3 deletions.
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -18,6 +18,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 - [#171](https://github.com/nf-core/nascent/pull/171) - Clean up MultiQC report
 - [#170](https://github.com/nf-core/nascent/pull/170) - Remove "Access to undefined parameter forwardStranded" warnings
+- [#173](https://github.com/nf-core/nascent/pull/173) - Fix config selectors
 
 ### Changed
 

diff --git a/conf/modules.config b/conf/modules.config
@@ -106,7 +106,7 @@ process {
         ]
     }
 
-    withName: ".*:FASTQ_ALIGN_HISAT2:HISAT2_ALIGN" {
+    withName: "HISAT2_ALIGN" {
         ext.args   = "--met-stderr --new-summary --dta"
         publishDir = [
             [
@@ -275,7 +275,7 @@ process {
         ]
     }
 
-    withName: '.*:BAM_RSEQC:RSEQC_READDISTRIBUTION ' {
+    withName: '.*:BAM_RSEQC:RSEQC_READDISTRIBUTION' {
         publishDir = [
             path: { "${params.outdir}/quality_control/rseqc/read_distribution" },
             mode: params.publish_dir_mode,

diff --git a/conf/test.config b/conf/test.config
@@ -42,7 +42,7 @@ params {
 }
 
 process {
-    withName: STAR_GENOMEGENERATE_IGENOMES {
+    withName: STAR_GENOMEGENERATE {
         ext.args = '--genomeSAindexNbases 9'
     }