Make genomic FASTA input optional #235
GitHub Actions / JUnit Test Report
failed
Jan 21, 2025 in 0s
40 tests run, 39 passed, 0 skipped, 1 failed.
Annotations
Check failure on line 1 in Test Subworkflow PREPARE_GENOME
github-actions / JUnit Test Report
Test Subworkflow PREPARE_GENOME.gfp = false
Assertion failed:
1 of 2 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.04.2
Launching `/home/runner/work/rnaseq/rnaseq/.nf-test-5e76b1622f3e89214ac015068690bb08.nf` [furious_minsky] DSL2 - revision: 1d12e6b471
WARN: The operator `first` is useless when applied to a value channel which returns a single value by definition
[2d/e2c7bb] Submitted process > PREPARE_GENOME:GTF_FILTER (genome.fasta)
[d1/ed9967] Submitted process > PREPARE_GENOME:CUSTOM_GETCHROMSIZES (genome.fasta)
[d1/c53716] Submitted process > PREPARE_GENOME:BBMAP_BBSPLIT (null)
[16/930093] Submitted process > PREPARE_GENOME:GTF2BED (genes_with_empty_tid.filtered.gtf)
Nextflow stderr:
Nextflow 24.10.4 is available - Please consider updating your version to it
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