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Migrate strelka pytest to nf-test (#1711) #6525

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Migrate strelka pytest to nf-test (#1711)

Migrate strelka pytest to nf-test (#1711) #6525

Triggered via push November 14, 2024 16:03
@maxulyssemaxulysse
pushed 600df5b
dev
Status Failure
Total duration 10m 21s
Artifacts –

ci.yml

on: push
Matrix: test
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24 errors
Test pipeline.Run with profile test | --tools strelka --no_intervals | germline: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline.Run with profile test | --tools strelka --no_intervals | germline: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | 24.04.2 | 3/5
Process completed with exit code 1.
Test pipeline | docker | latest-everything | 3/5
Process completed with exit code 1.
Test pipeline.Run with profile test | --tools strelka --no_intervals | somatic: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | latest-everything | 5/5
Process completed with exit code 1.
Test pipeline.Run with profile test | --tools strelka --no_intervals | somatic: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | 24.04.2 | 5/5
Process completed with exit code 1.
Test pipeline.Run with profile test | --tools strelka | somatic: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | 24.04.2 | 4/5
Process completed with exit code 1.
Test pipeline.Run with profile test | --tools strelka | somatic: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | latest-everything | 4/5
Process completed with exit code 1.
Test pipeline.Run with profile test | --tools strelka | germline: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline.Run with profile test | --tools manta,strelka --no_intervals | somatic: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | 24.04.2 | 2/5
Process completed with exit code 1.
Test pipeline.Run with profile test | --tools strelka --only_paired_variant_calling: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline.Run with profile test | --tools manta,strelka | somatic: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | latest-everything | 1/5
Process completed with exit code 1.
Test pipeline.Run with profile test | --tools strelka | germline: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline.Run with profile test | --tools manta,strelka --no_intervals | somatic: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | latest-everything | 2/5
Process completed with exit code 1.
Test pipeline.Run with profile test | --tools strelka --only_paired_variant_calling: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline.Run with profile test | --tools manta,strelka | somatic: Test pipeline#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline | docker | 24.04.2 | 1/5
Process completed with exit code 1.