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feat: add MuSE as new somatic variant caller #6571

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feat: add MuSE as new somatic variant caller

feat: add MuSE as new somatic variant caller #6571

Triggered via pull request December 5, 2024 14:57
@famosabfamosab
synchronize #1744
famosab:muse
Status Cancelled
Total duration 6m 55s
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ci.yml

on: pull_request
Matrix: test
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44 errors and 32 warnings
Test workflow | docker | latest-everything | 5/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | latest-everything | 4/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test workflow | docker | latest-everything | 3/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | 24.04.2 | 2/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test workflow | docker | 24.04.2 | 3/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test workflow | docker | latest-everything | 1/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test workflow | docker | latest-everything | 4/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test workflow | docker | 24.04.2 | 2/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | latest-everything | 1/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | 24.04.2 | 1/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test workflow | docker | 24.04.2 | 1/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | latest-everything | 3/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | latest-everything | 2/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | 24.04.2 | 5/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | latest-everything | 5/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test function | docker | 24.04.2 | 3/5
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration - https://docs.github.com/rest/checks/runs#create-a-check-run)
Test workflow | docker | 24.04.2 | 4/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test workflow | docker | 24.04.2 | 4/5
The operation was canceled.
Test function | docker | 24.04.2 | 4/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test function | docker | 24.04.2 | 4/5
The operation was canceled.
Test pipeline | docker | 24.04.2 | 1/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | 24.04.2 | 1/5
The operation was canceled.
Test pipeline | docker | latest-everything | 5/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | latest-everything | 5/5
The operation was canceled.
Test workflow | docker | 24.04.2 | 5/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test workflow | docker | 24.04.2 | 5/5
The operation was canceled.
Test pipeline | docker | 24.04.2 | 3/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | 24.04.2 | 3/5
The operation was canceled.
Test pipeline | docker | 24.04.2 | 5/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | 24.04.2 | 5/5
The operation was canceled.
Test pipeline | docker | latest-everything | 3/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | latest-everything | 3/5
The operation was canceled.
Test workflow | docker | latest-everything | 2/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test workflow | docker | latest-everything | 2/5
The operation was canceled.
Test pipeline | docker | latest-everything | 1/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | latest-everything | 1/5
The operation was canceled.
Test pipeline | docker | 24.04.2 | 2/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | 24.04.2 | 2/5
The operation was canceled.
Test pipeline | docker | 24.04.2 | 4/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | 24.04.2 | 4/5
The operation was canceled.
Test pipeline | docker | latest-everything | 2/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | latest-everything | 2/5
The operation was canceled.
Test pipeline | docker | latest-everything | 4/5
Canceling since a higher priority waiting request for 'nf-core CI-1744' exists
Test pipeline | docker | latest-everything | 4/5
The operation was canceled.
Test workflow | docker | latest-everything | 5/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test workflow | docker | latest-everything | 5/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | latest-everything | 4/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | latest-everything | 4/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test workflow | docker | latest-everything | 3/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test workflow | docker | latest-everything | 3/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | 24.04.2 | 2/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | 24.04.2 | 2/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test workflow | docker | 24.04.2 | 3/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test workflow | docker | 24.04.2 | 3/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test workflow | docker | latest-everything | 1/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test workflow | docker | latest-everything | 1/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test workflow | docker | latest-everything | 4/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test workflow | docker | latest-everything | 4/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test workflow | docker | 24.04.2 | 2/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test workflow | docker | 24.04.2 | 2/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | latest-everything | 1/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | latest-everything | 1/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | 24.04.2 | 1/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | 24.04.2 | 1/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test workflow | docker | 24.04.2 | 1/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test workflow | docker | 24.04.2 | 1/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | latest-everything | 3/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | latest-everything | 3/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | latest-everything | 2/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | latest-everything | 2/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | 24.04.2 | 5/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | 24.04.2 | 5/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | latest-everything | 5/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | latest-everything | 5/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Test function | docker | 24.04.2 | 3/5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test function | docker | 24.04.2 | 3/5
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23