Update save plot documentation

nvelden · Jun 19, 2024 · f4445ac · f4445ac
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Showing 140 changed files with 519 additions and 349 deletions.
diff --git a/docs/articles/BLASTP.html b/docs/articles/BLASTP.html
diff --git a/docs/articles/BLASTP_files/D3-7.8.5/geneviewerwidget.js b/docs/articles/BLASTP_files/D3-7.8.5/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/BLASTP_files/D3-7.8.5/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/BLASTP_files/D3-7.8.5/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/BLASTP_files/FileSaver-2.0.4-2.0.4/geneviewerwidget.js b/docs/articles/BLASTP_files/FileSaver-2.0.4-2.0.4/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/BLASTP_files/FileSaver-2.0.4-2.0.4/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/BLASTP_files/FileSaver-2.0.4-2.0.4/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/BLASTP_files/Themes-0.1.8/geneviewerwidget.js b/docs/articles/BLASTP_files/Themes-0.1.8/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/BLASTP_files/Themes-0.1.8/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/BLASTP_files/Themes-0.1.8/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/BLASTP_files/geneviewer-0.1.8/geneviewerwidget.js b/docs/articles/BLASTP_files/geneviewer-0.1.8/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/BLASTP_files/geneviewer-0.1.8/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/BLASTP_files/geneviewer-0.1.8/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/BLASTP_files/geneviewerwidget-0.1.8/geneviewerwidget.js b/docs/articles/BLASTP_files/geneviewerwidget-0.1.8/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/BLASTP_files/geneviewerwidget-0.1.8/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/BLASTP_files/geneviewerwidget-0.1.8/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/BLASTP_files/html2canvas-1.4.1/geneviewerwidget.js b/docs/articles/BLASTP_files/html2canvas-1.4.1/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/BLASTP_files/html2canvas-1.4.1/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/BLASTP_files/html2canvas-1.4.1/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/Examples.html b/docs/articles/Examples.html
diff --git a/docs/articles/Examples_files/D3-7.8.5/geneviewerwidget.js b/docs/articles/Examples_files/D3-7.8.5/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/Examples_files/D3-7.8.5/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/Examples_files/D3-7.8.5/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/Examples_files/FileSaver-2.0.4-2.0.4/geneviewerwidget.js b/docs/articles/Examples_files/FileSaver-2.0.4-2.0.4/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/Examples_files/FileSaver-2.0.4-2.0.4/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/Examples_files/FileSaver-2.0.4-2.0.4/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/Examples_files/Themes-0.1.8/geneviewerwidget.js b/docs/articles/Examples_files/Themes-0.1.8/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/Examples_files/Themes-0.1.8/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/Examples_files/Themes-0.1.8/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function

diff --git a/docs/articles/Examples_files/geneviewer-0.1.8/geneviewerwidget.js b/docs/articles/Examples_files/geneviewer-0.1.8/geneviewerwidget.js
@@ -173,7 +173,7 @@ HTMLWidgets.widget({
       }
 
       // Save icon
-      createSaveIcon(widgetId, el);
+      createSaveIcon(widgetId, el, show = saveButton);
 
     };
 
@@ -203,6 +203,7 @@ HTMLWidgets.widget({
         data = HTMLWidgets.dataframeToD3(input.data);
         links = input.links;
         series = input.series;
+        saveButton = input.saveButton;
         titleOptions = input.title;
         legendOptions = input.legend;
         draw(width, height);

diff --git a/docs/articles/Examples_files/geneviewer-0.1.8/lib/geneviewer-0.1.8/geneviewer.js b/docs/articles/Examples_files/geneviewer-0.1.8/lib/geneviewer-0.1.8/geneviewer.js
@@ -583,9 +583,10 @@ function addScalePadding(startValue, endValue, padding, to) {
   }
 }
 
-function createSaveIcon(widgetId, el) {
-    // Create an icon in the top right corner of the container div
-    var icon = d3.select(el).append("i")
+function createSaveIcon(widgetId, el, show = true) {
+
+  if (show) {
+      var icon = d3.select(el).append("i")
         .attr("class", "fa-solid fa-download")
         .attr("id", `saveIcon-${widgetId}`)
         .style("position", "absolute")
@@ -645,6 +646,7 @@ function createSaveIcon(widgetId, el) {
             });
         });
     });
+  }
 }
 
 // Make links function