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Update run.sh
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matentzn committed May 15, 2024
1 parent a537576 commit faf2171
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion src/ontology/run.sh
Original file line number Diff line number Diff line change
Expand Up @@ -94,7 +94,7 @@ if [ -n "$USE_SINGULARITY" ]; then
-W $WORK_DIR \
docker://obolibrary/$ODK_IMAGE:$ODK_TAG $TIMECMD "$@"
else
BIND_OPTIONS="-v $(echo $VOLUME_BIND | sed 's/,/ -v /g')"
BIND_OPTIONS="-v $(echo $VOLUME_BIND | sed 's/,/ -v /')"
docker run $ODK_DOCKER_OPTIONS $BIND_OPTIONS -w $WORK_DIR \
-e ROBOT_JAVA_ARGS="$ODK_JAVA_OPTS" -e JAVA_OPTS="$ODK_JAVA_OPTS" -e SSH_AUTH_SOCK=/run/host-services/ssh-auth.sock -e ODK_USER_ID=$ODK_USER_ID -e ODK_GROUP_ID=$ODK_GROUP_ID -e ODK_DEBUG=$ODK_DEBUG \
--rm -ti obolibrary/$ODK_IMAGE:$ODK_TAG $TIMECMD "$@"
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