Bump scIB to v1.1.7 (#30)

openproblems-bio · Jan 16, 2025 · 058ebf0 · 058ebf0
1 parent 5abd7b5
commit 058ebf0
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Showing 10 changed files with 10 additions and 10 deletions.
diff --git a/src/data_processors/process_dataset/config.vsh.yaml b/src/data_processors/process_dataset/config.vsh.yaml
@@ -11,7 +11,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow

diff --git a/src/metrics/asw_batch/config.vsh.yaml b/src/metrics/asw_batch/config.vsh.yaml
@@ -45,7 +45,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow

diff --git a/src/metrics/asw_label/config.vsh.yaml b/src/metrics/asw_label/config.vsh.yaml
@@ -33,7 +33,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow

diff --git a/src/metrics/clustering_overlap/config.vsh.yaml b/src/metrics/clustering_overlap/config.vsh.yaml
@@ -65,7 +65,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.6
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow

diff --git a/src/metrics/graph_connectivity/config.vsh.yaml b/src/metrics/graph_connectivity/config.vsh.yaml
@@ -42,7 +42,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow

diff --git a/src/metrics/hvg_overlap/config.vsh.yaml b/src/metrics/hvg_overlap/config.vsh.yaml
@@ -41,7 +41,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow

diff --git a/src/metrics/isolated_label_asw/config.vsh.yaml b/src/metrics/isolated_label_asw/config.vsh.yaml
@@ -34,7 +34,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow

diff --git a/src/metrics/isolated_label_f1/config.vsh.yaml b/src/metrics/isolated_label_f1/config.vsh.yaml
@@ -53,7 +53,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.6
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow

diff --git a/src/metrics/kbet/config.vsh.yaml b/src/metrics/kbet/config.vsh.yaml
@@ -50,7 +50,7 @@ engines:
         github: theislab/kBET
       - type: python
         pypi:
-          - scib==1.1.6
+          - scib==1.1.7
           - rpy2>=3
           - anndata2ri
           - scipy<=1.13

diff --git a/src/metrics/pcr/config.vsh.yaml b/src/metrics/pcr/config.vsh.yaml
@@ -39,7 +39,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow