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Update emd per matching sample metric#16

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ghar1821 wants to merge 18 commits intomainopenproblems-bio/task_cyto_batch_integration:mainfrom add-emd-per-matching-sample-metricopenproblems-bio/task_cyto_batch_integration:add-emd-per-matching-sample-metricCopy head branch name to clipboard

+181-100

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Commits on Dec 18, 2024

• first commit

  ghar1821

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  473b603

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• Merge branch 'main' into add-emd-per-matching-sample-metric

  ghar1821

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  b77453b

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• Update CHANGELOG.md

  ghar1821

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Commits on Dec 19, 2024

• Merge remote-tracking branch 'origin/main' into add-emd-per-matching-sample-metric

  rcannood

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  688d648

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• change samples_to_compare default values

  ghar1821

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Commits on Dec 20, 2024

• update from main branch

  ghar1821

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Commits on Jan 18, 2025

• wip

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  56143b8

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• Merge branch 'main' into add-emd-per-matching-sample-metric

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Commits on Jan 20, 2025

• fix error when input_validation is empty

  ghar1821

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  c91c29d

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• Update CHANGELOG.md

  ghar1821

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  76a625d

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• cleaning up files

  ghar1821

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Commits on Jan 30, 2025

• Update script.py

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  ghar1821

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  9ec53ff

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• transfer obs to integrated h5ad so methods don't need to

  rcannood

  committed
  478099f

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• remove argument from wf

  rcannood

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• update scripts

  rcannood

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Commits on Feb 6, 2025

• Merge branch 'main' into add-emd-per-matching-sample-metric

  ghar1821

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  2627e99

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• update emd metric

  ghar1821

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• trigger ci on all components [ci force]

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