Merge pull request #6 from openproblems-bio/feature/issue-3/deprecate…

…-dtype Deprecate dtype
openproblems-bio · Jul 5, 2024 · 1c1d064 · 1c1d064
2 parents 0921fb0 + 7bb2773
commit 1c1d064
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -8,7 +8,12 @@
 
 ## NEW FUNCTIONALITY
 
-* Add `CHANGELOG.md` (PR #7)
+* Add `CHANGELOG.md` (PR #7).
+
+## MINOR CHANGES
+
+* Remove dtype parameter in `.Anndata()` (PR #6).
+
 
 ## transfer from openproblems-v2 repository
 

diff --git a/src/metrics/mse/script.py b/src/metrics/mse/script.py
@@ -18,8 +18,8 @@
 input_denoised = ad.read_h5ad(par['input_prediction'])
 input_test = ad.read_h5ad(par['input_test'])
 
-test_data = ad.AnnData(X=input_test.layers["counts"], dtype="float")
-denoised_data = ad.AnnData(X=input_denoised.layers["denoised"], dtype="float")
+test_data = ad.AnnData(X=input_test.layers["counts"])
+denoised_data = ad.AnnData(X=input_denoised.layers["denoised"])
 
 print("Normalize data", flush=True)