update metrics references api

openproblems-bio · Sep 2, 2024 · fd3d218 · fd3d218
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commit fd3d218
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diff --git a/src/metrics/mse/config.vsh.yaml b/src/metrics/mse/config.vsh.yaml
@@ -6,7 +6,8 @@ info:
       label: Mean-squared error
       summary: "The mean squared error between the denoised counts and the true counts."
       description: "The mean squared error between the denoised counts of the training dataset and the true counts of the test dataset after reweighing by the train/test ratio"
-      reference: batson2019molecular
+      references:
+        doi: 10.1101/786269
       v1:
         path: openproblems/tasks/denoising/metrics/mse.py
         commit: b3456fd73c04c28516f6df34c57e6e3e8b0dab32

diff --git a/src/metrics/poisson/config.vsh.yaml b/src/metrics/poisson/config.vsh.yaml
@@ -6,7 +6,8 @@ info:
       label: Poisson Loss
       summary: "The Poisson log likelihood of the true counts observed in the distribution of denoised counts"
       description: "The Poisson log likelihood of observing the true counts of the test dataset given the distribution given in the denoised dataset."
-      reference: batson2019molecular
+      references:
+        doi: 10.1101/786269
       v1:
         path: openproblems/tasks/denoising/metrics/poisson.py
         commit: b3456fd73c04c28516f6df34c57e6e3e8b0dab32