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scenic+ was modified to prevent biomart issue. #214

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scenic+ was modified to prevent biomart issue.

scenic+ was modified to prevent biomart issue. #214

Run time

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Job Run time
list
53s
viash_test (metrics/regression_2, /home/runner/work/task_grn_inference/task_grn_inference/src/met...
24s
viash_test (metrics/regression_1, /home/runner/work/task_grn_inference/task_grn_inference/src/met...
26s
viash_test (grn_methods/scgpt, /home/runner/work/task_grn_inference/task_grn_inference/src/method...
25s
viash_test (grn_methods/ppcor, /home/runner/work/task_grn_inference/task_grn_inference/src/method...
35s
viash_test (grn_methods/portia, /home/runner/work/task_grn_inference/task_grn_inference/src/metho...
1m 18s
viash_test (grn_methods/genie3, /home/runner/work/task_grn_inference/task_grn_inference/src/metho...
33s
viash_test (grn_methods/grnboost2, /home/runner/work/task_grn_inference/task_grn_inference/src/me...
29s
viash_test (grn_methods/scenic, /home/runner/work/task_grn_inference/task_grn_inference/src/metho...
1m 27s
viash_test (grn_methods/scenicplus, /home/runner/work/task_grn_inference/task_grn_inference/src/m...
1m 24s
viash_test (grn_methods/scglue, /home/runner/work/task_grn_inference/task_grn_inference/src/metho...
1m 17s
viash_test (grn_methods/celloracle, /home/runner/work/task_grn_inference/task_grn_inference/src/m...
1m 34s
viash_test (common/create_component, /home/runner/work/task_grn_inference/task_grn_inference/src/...
1m 29s
viash_test (common/sync_test_resources, /home/runner/work/task_grn_inference/task_grn_inference/s...
40s
viash_test (common/create_task_readme, /home/runner/work/task_grn_inference/task_grn_inference/sr...
1m 18s
viash_test (robustness_analysis/noise_grn, /home/runner/work/task_grn_inference/task_grn_inferenc...
50s
viash_test (control_methods/positive_control, /home/runner/work/task_grn_inference/task_grn_infer...
3m 28s
viash_test (control_methods/negative_control, /home/runner/work/task_grn_inference/task_grn_infer...
28s
viash_test (control_methods/pearson_corr, /home/runner/work/task_grn_inference/task_grn_inference...
26s
viash_test (perturbation/batch_correction_scgen, /home/runner/work/task_grn_inference/task_grn_in...
1m 50s
viash_test (perturbation/normalization, /home/runner/work/task_grn_inference/task_grn_inference/s...
1m 20s
viash_test (perturbation/batch_correction_evaluation, /home/runner/work/task_grn_inference/task_g...
1m 2s
viash_test (perturbation/sc_counts, /home/runner/work/task_grn_inference/task_grn_inference/src/p...
31s
viash_test (perturbation/batch_correction_seurat, /home/runner/work/task_grn_inference/task_grn_i...
1m 18s
viash_test (multiomics/format_data, /home/runner/work/task_grn_inference/task_grn_inference/src/p...
1m 52s
viash_test (multiomics/subset_hvg, /home/runner/work/task_grn_inference/task_grn_inference/src/pr...
58s
viash_test (multiomics/format_resources_r, /home/runner/work/task_grn_inference/task_grn_inferenc...
2m 16s
viash_test (multiomics/multiome_matrix, /home/runner/work/task_grn_inference/task_grn_inference/s...
49s
viash_test (exp_analysis/gene_annotation, /home/runner/work/task_grn_inference/task_grn_inference...
54s
viash_test (testdata/create_test_data, /home/runner/work/task_grn_inference/task_grn_inference/sr...
1m 57s
34m 11s