scenic+ memory updated

_viash.yaml

@@ -11,5 +11,5 @@ config_mods: |
   .platforms[.type == 'docker'].target_image_source := 'https://github.com/openproblems-bio/task_grn_inference'
   .platforms[.type == "nextflow"].directives.tag := "$id"
   .platforms[.type == "nextflow"].auto.simplifyOutput := false
-  .platforms[.type == "nextflow"].config.labels := { lowmem : "memory = 20.Gb", midmem : "memory = 50.Gb", highmem : "memory = 100.Gb", lowcpu : "cpus = 5", midcpu : "cpus = 15", highcpu : "cpus = 30", lowtime : "time = 1.h", midtime : "time = 4.h", hightime : "time = 8.h", onedaytime : "time = 24.h", threedaystime : "time = 72.h", oneweektime : "time = 168.h" }
+  .platforms[.type == "nextflow"].config.labels := { lowmem : "memory = 20.Gb", midmem : "memory = 50.Gb", highmem : "memory = 100.Gb", 250GBmem : "memory = 250.Gb", lowcpu : "cpus = 5", midcpu : "cpus = 15", highcpu : "cpus = 30", lowtime : "time = 1.h", midtime : "time = 4.h", hightime : "time = 8.h", onedaytime : "time = 24.h", threedaystime : "time = 72.h", oneweektime : "time = 168.h" }
   .platforms[.type == "nextflow"].config.script := "process.errorStrategy = 'ignore'"

src/methods/multi_omics/scenicplus/config.vsh.yaml

@@ -46,4 +46,4 @@ platforms:
   - type: native
   - type: nextflow
     directives:
-      label: [midtime,midmem,midcpu]
+      label: [onedaytime,250GBmem,highcpu]

src/methods/multi_omics/scenicplus/script.py

@@ -36,8 +36,9 @@
 if args.num_workers:
     par['num_workers'] = args.num_workers
 
-meta = {}
+
 if args.resources_dir:
+    meta = {}
     meta['resources_dir'] = args.resources_dir  
 par['num_workers'] = int(par['num_workers'])
 print(par)

src/methods/multi_omics/scenicplus_ns/config.vsh.yaml

@@ -40,4 +40,4 @@ functionality:
 platforms:
   - type: nextflow
     directives:
-      label: [ onedaytime, highmem, highcpu ]
+      label: [ onedaytime, 250GBmem, highcpu ]