Code

Extend documentation pages#300

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rcannood merged 59 commits intomainopenproblems-bio/website:mainfrom update_contentsopenproblems-bio/website:update_contentsCopy head branch name to clipboardJan 12, 2024

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Commits

Commits on Jun 29, 2023

• add task_info.yaml description

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• reference task_info.yaml

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Commits on Jul 6, 2023

• rephrase

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Commits on Jul 13, 2023

• update task_info section

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• Merge remote-tracking branch 'origin/main' into update/task-docs

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• update changelog

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• update gitignore

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• update renv version

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• Merge branch 'main' into update/task-docs

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Commits on Jul 14, 2023

• use read_and_merge

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Commits on Jul 20, 2023

• add the metadat script to control and metric

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Commits on Jul 27, 2023

• fix metrics metadata

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Commits on Aug 28, 2023

• WIP define_task

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Commits on Aug 31, 2023

• Merge remote-tracking branch 'origin/main' into update/task-docs

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Commits on Sep 8, 2023

• Merge remote-tracking branch 'origin/main' into update/task-docs

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• update step 3 task info

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Commits on Sep 14, 2023

• update define task

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• fix cheat sheet

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Commits on Dec 19, 2023

• update submodule

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• move dataset loaders to advanced topics

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• create placeholder for selecting datasets

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• change structure of reference docs

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• rename celltype to cell_type

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• show datasets

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Commits on Dec 20, 2023

• move bibliography to documentation

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• Merge remote-tracking branch 'origin/main' into update_contents

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• rewrite philosophy page, move code of conduct statement

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• add redirects, move library, remove link to code of conduct

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• update submodule

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• remove duplicate info

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• fix paths

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• Merge remote-tracking branch 'origin/update/task-docs' into update_contents

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• generate task info in R

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Commits on Dec 21, 2023

• add selects to ensure data integrity

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  126b0ba

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• restructure pages

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• update documentation on datasets

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• change listings and descriptions, start adding glossary

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• try moving defaults to quarto.yml, move css to styles/

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• fix broken links

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• fix broken paths

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• remove unnecessary code

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• fix paths

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Commits on Dec 22, 2023

• fix url

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• improve glossary, add a few placeholder pages

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• add listings and descriptions to all the pages

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• move tech stack

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• update gitignore

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• use custom glossary format

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• extend glossary

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• extend glossary

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• move citations in tasks to the bottom

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Commits on Jan 10, 2024

• rework fundamentals

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• remove datasets reference page

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• make the schema fields easier to read

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Commits on Jan 11, 2024

• add icon to glossary tooltips

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• remove page

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• add page on safeguards

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Commits on Jan 12, 2024

• fix listing

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• use bi-question-circle

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