chore: remove the locus_radius parameter (#659)

Code inspection shows that it is not used anymore.
opentargets · Jun 25, 2024 · b839164 · b839164
1 parent 8ff4bfc
commit b839164
Showing 1 changed file with 0 additions and 2 deletions.
diff --git a/src/gentropy/susie_finemapper.py b/src/gentropy/susie_finemapper.py
@@ -47,7 +47,6 @@ def __init__(
         study_locus_collected_path: str,
         study_index_path: str,
         output_path: str,
-        locus_radius: int = 500_000,
         max_causal_snps: int = 10,
         primary_signal_pval_threshold: float = 1,
         secondary_signal_pval_threshold: float = 1,
@@ -71,7 +70,6 @@ def __init__(
             study_locus_collected_path (str): path to the collected study locus
             study_index_path (str): path to the study index
             output_path (str): path to the output
-            locus_radius (int): Radius of base-pair window around the locus, default is 500_000
             max_causal_snps (int): Maximum number of causal variants in locus, default is 10
             primary_signal_pval_threshold (float): p-value threshold for the lead variant from the primary signal (credibleSetIndex==1), default is 5e-8
             secondary_signal_pval_threshold (float): p-value threshold for the lead variant from the secondary signals, default is 1e-7