build: define dependency version constraints + other fixes

[ireneisdoomed]

✨ Context

A recent update to the scikit-learn package has caused the L2G step in Gentropy to fail due to an incompatibility between scikit-learn and another dependency, skops.

Specifically:

• scikit-learn has been updated to version 1.6.0, which is incompatible with skops==0.10.0.
• Our current TOML specifies the following version constraints:

  skops = ">=0.9,<0.11"
  scikit-learn = "^1.3.2"
  

because skops does not pin the version of scikit-learn, dependency resolution results in incompatible package versions when a user installs the Gentropy wheel now:

• the latest version of scikit-learn (e.g., 1.6.0) will be installed.
• skops==0.10.x will be installed, which is not compatible with scikit-learn==1.6.0.

🛠 What does this PR implement

In this PR, we define upper limits to the version constraints of all dependencies. This way that we avoid resolving to versions including minor updates that have not been tested.

• Definition of an upper bound version for all dependencies
• Bump scikit-learn to 1.6 and skops to 0.11. I have tested that with these updates the step runs.
• Addition of a test to make sure that all gentropy modules are importable
• Moving all dev dependencies to the same group

🙈 Missing

🚦 Before submitting

• Do these changes cover one single feature (one change at a time)?
• Did you read the contributor guideline?
• Did you make sure to update the documentation with your changes?
• Did you make sure there is no commented out code in this PR?
• Did you follow conventional commits standards in PR title and commit messages?
• Did you make sure the branch is up-to-date with the dev branch?
• Did you write any new necessary tests?
• Did you make sure the changes pass local tests (make test)?
• Did you make sure the changes pass pre-commit rules (e.g poetry run pre-commit run --all-files)?

[project-defiant]

To sum this PR:

• fix on the upper bound of the package versions (this makes the caret operator redundant in all cases (https://python-poetry.org/docs/dependency-specification/#caret-requirements)
• Test to check if all modules are importable.

Note: We could fix the versions in more famiialar way (>=X, <Y) (a bit simpler to understand then the caret operator.

[project-defiant]

prettier version would never reach 0.0.8 and above

[ireneisdoomed]

@SzymonSzyszkowski I changed the caret so that it is more explicit.Thank you ^^

[project-defiant]

@ireneisdoomed well done!