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  • Pathology Dept, University of Otago
  • Dunedin New Zealand

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  1. scan_tcga_mRNAs scan_tcga_mRNAs Public

    Code for scanning TCGA data for the expression levels of specific genes

    2 1

  2. DMAP DMAP Public

    Differential Methylation Analysis Package

    C 2 1

  3. DMAP2 DMAP2 Public

    Scripts to simplify use of DMAP

    Shell

  4. RepExpress RepExpress Public

    A pipeline for quantifying and exploring transposable element expression

    Shell 1

  5. Scan_tcga_methylation Scan_tcga_methylation Public

    For scanning TCGA methylation data for patient subgroups by chromosomal regions

    1

  6. Scan_tcga_miRNAs Scan_tcga_miRNAs Public

    Code to scan tcga files for specific microRNAs

    1