Stars
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Generate random names (adj-noun) like docker and github.
Libre calorie counter app for Android. Built with Cordova.
Accurate metagenomic profiling && Fast large-scale sequence/genome searching
This repo collects the list of learning online resources related to microbiome computational science and tools.
Python package for compositional data analysis including CLR/ILR, proportionality, partial correlation with basis shrinkage, and visualizations.
TwitRSS.me: Tool to make Twittter timelines and searches into RSS feeds
An opinionated list of awesome Python frameworks, libraries, software and resources.
Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies
a python package for fast random access to sequences from plain and gzipped FASTA/Q files
Interactive Data Visualization in the browser, from Python
A high-performance, Pythonic language for bioinformatics
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
Code examples of fast and simple k-mer counters for tutorial purposes
Conda recipes for the bioconda channel.
Master the command line, in one page
With Holoviews, your data visualizes itself.
Extremely simple yet powerful header-only C++ plotting library built on the popular matplotlib
Reprocible analyses accompanying the paper introducing the decontam method