Merge branch 'master' of github.com:pombase/website

pombase · Jan 23, 2025 · 7e4ee78 · 7e4ee78
2 parents 519c5ea + c6ef268
commit 7e4ee78
Showing 1 changed file with 3 additions and 5 deletions.
diff --git a/.github/ISSUE_TEMPLATE/template-for-jbrowse-dataset-hosting.md b/.github/ISSUE_TEMPLATE/template-for-jbrowse-dataset-hosting.md
@@ -3,11 +3,9 @@ name: Template for JBrowse dataset hosting
 about: Pre-filled table for Genome Browser dataset configuration in JBrowse
 title: JBrowse dataset [First author, Year of publication, Type of data, PMID]
 labels: genome browser
-assignees: ''
+assignees: PCarme
 
 ---
 
-| Column content | Type of Data (**Mandatory**) | Track label (**Mandatory**) | Assayed gene product (optional, only required for chromatin binding data)| Strain background (**Mandatory**) | WT or mutant (**Mandatory**) | Mutant allele (optional, 'not applicable' if WT) | Conditions (optional) | Comment (optional) | Growth phase (**Mandatory**) | Strand (Optional) | Assay type (**Mandatory**) | Surname of first author (**Mandatory**) | Publication year (**Mandatory**) | PubMed ID (**Mandatory**) | Database (optional, if dataset publicly available) | Database ID of the study (optional, required if Database has a value) | Database Sample ID (optional) | File type (**Mandatory**) | File name (**Mandatory**) |
-| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
-| Examples | Transcripts, Nucleosome binding, Poly(A) sites... | Transcripts in atf1delta (forward strand) - Soriano et al. (2013) | Fkh2 | h- cdc25-22, leu1-1 | WT / mutant | clr4delta, dfp1-3A | YES, high temperature; glucose MM, standard temperature + HU... | free-text field for additional information | vegetative growth, meiosis, quiescence... | forward / reverse | 	tiling microarray, RNA-seq, HT sequencing... | Soriano | 2013 | 31077324 | GEO, ArrayExpress | GSE110976, PRJEB7403 | GSM3019628, ERS555567 | bigwig, bed, rnaseq... | name given to submitted data file relevant to the track |
-| Values |     |     |     |     |     |     |     |      |     |     |     |     |     |     |     |     |     |     |     |
+Template spreadsheet available here: 
+https://docs.google.com/spreadsheets/d/1M19o0VRF_GNK0_fu2tuiPkRnNtrK37yGWlx9aHVSsNc/edit?usp=sharing