Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add documentation for handling of crashing micro simulations #106

Merged
merged 2 commits into from
May 22, 2024
Merged

Add documentation for handling of crashing micro simulations #106

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
0e53281
Add documentation for handling of crashing micro simulations
tjwsch May 22, 2024
f2cde01
Rewording
IshaanDesai May 22, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 4 additions & 0 deletions docs/running.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -16,3 +16,7 @@ The Micro Manager can also be run in parallel
```bash
mpiexec -n micro-manager-precice micro-manager-config.json
```

## What Happens When a Micro Simulation Crashes?

If a micro simulation crashes, the Micro Manager attempts to continue running. The error message from the micro simulation, along with the macro location are logged in the Micro Manager log file. The Micro Manager continues the simulation run even if a micro simulation crashes. Results of the crashed micro simulation are generated by interpolating results of a certain number of similar running simulations. The [inverse distance weighed](https://en.wikipedia.org/wiki/Inverse_distance_weighting) method is used. If more than 20% of global micro simulations crash or if locally no neighbors are available for interpolation, the Micro Manager terminates.