install biom-format from conda

qiita-spots · Apr 8, 2022 · 49cd181 · 49cd181
1 parent b65b99d
commit 49cd181
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diff --git a/.github/workflows/qiita-ci.yml b/.github/workflows/qiita-ci.yml
@@ -96,6 +96,7 @@ jobs:
           export REDBIOM_HOST="http://localhost:7379"
 
           pip install . --no-binary redbiom
+          conda install -c conda-forge --yes biom-format
           pwd
           mkdir ~/.qiita_plugins
 

diff --git a/setup.py b/setup.py
@@ -102,7 +102,7 @@
       scripts=glob('scripts/*'),
       # making sure that numpy is installed before biom
       setup_requires=['numpy', 'cython'],
-      install_requires=['psycopg2', 'click', 'bcrypt', 'pandas', 'future',
+      install_requires=['psycopg2', 'click', 'bcrypt', 'pandas',
                         'biom-format', 'tornado<6.0', 'toredis', 'redis',
                         'scp', 'pyparsing', 'h5py',  'natsort', 'nose', 'pep8',
                         'networkx', 'humanize', 'wtforms<3.0.0', 'nltk',