v1.2.1

• Minor updates
• Performance improvements

v1.2.0

• Breaking changes.
• Simplified interface.
• Added consensus statistical test.
• Updated visualizations.
• Accumulated performance improvements.

v.1.1.0

• Accumulated updates and performance improvements.

v1.0.1

• Update influence matrices to be stored/loaded as HDF5 by default.
• Fix transpose error in generating influence matrices.
• Small bug fixes to visualization.

HotNet2 Release

Initial non-beta release of HotNet2 associated with the publication of:

M.D.M. Leiserson, F. Vandin, H.T. Wu, J.R. Dobson, J.V. Eldridge, J.L. Thomas, A. Papoutsaki, Y. Kim, B. Niu, M. McLellan, M.S. Lawrence, A.G. Perez, D. Tamborero, Y. Cheng, G.A. Ryslik, N. Lopez-Bigas, G. Getz, L. Ding, and B.J. Raphael. (2014) Pan-Cancer Network Analysis Identifies Combinations of Rare Somatic Mutations across Pathways and Protein Complexes. Nature Genetics. In press.

This release supports running both HotNet2 as well as the classic HotNet algorithm and contains significant
performance and output visualization improvements over previous versions.

Beta release of HotNet2.

Fixes visualization bugs.

Beta release of HotNet2.

v0.0.1-beta

Fixed formatting in example/README.md