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Merge pull request #191 from riparias/99-update-readme-to-reflect-rem…
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…oval-of-install_packagesr

update to reflect package structure
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PietrH authored Jun 21, 2024
2 parents e41b6ff + 851d698 commit afbe083
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions README.md
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Expand Up @@ -37,7 +37,6 @@ The repository structure is based on [Cookiecutter Data Science](http://drivenda
│ ├── dwc_mapping.Rmd : Darwin Core mapping script
│ ├── run_fetch_data.R : R script to run code in fetch_data.Rmd in an automatic way within a GitHub action
│ ├── run_dwc_mapping.R : R script to run code in dcw_mapping.Rmd in an automatic way within a GitHub action
│ └── install_packages.R : R script to install all needed packages
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└── data
│ └── processed : Darwin Core output of mapping script GENERATED
Expand All @@ -47,7 +46,7 @@ The repository structure is based on [Cookiecutter Data Science](http://drivenda

1. Clone this repository to your computer
2. Open the RStudio project file
3. Run `install_packages.R` to install any required packages
3. Run `devtools::install()` to install any required packages
4. Open `fetch_data.Rmd` [R Markdown file](https://rmarkdown.rstudio.com/) in RStudio to fetch data manually
5. Open the `dwc_mapping.Rmd` [R Markdown file](https://rmarkdown.rstudio.com/) in RStudio to map data to DwC manually
6. Click `Run > Run All` to generate the processed data
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