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Merge pull request #197 from rs-station/broken_links
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Update example interactive maps to point to rs-station
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JBGreisman authored Nov 11, 2022
2 parents ad6aec1 + e8bf808 commit 3594ec8
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Showing 3 changed files with 13 additions and 21 deletions.
15 changes: 4 additions & 11 deletions docs/examples/4_anomalousmap.ipynb
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Expand Up @@ -31,7 +31,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"0.10.2\n"
"0.10.3\n"
]
}
],
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"source": [
"alpha = 90 + 180*(anom[\"FW-F(+)\"] >= anom[\"FW-F(-)\"])\n",
"anom[\"PHANOM\"] = ref.loc[hkls, \"PH2FOFCWT\"] + alpha\n",
"anom[\"PHANOM\"] = rs.utils.canonicalize_phases(anom[\"PHANOM\"].astype(\"Phase\"))"
"anom[\"PHANOM\"] = rs.utils.canonicalize_phases(anom[\"PHANOM\"]).astype(\"Phase\")"
]
},
{
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"data": {
"text/html": [
"<center>\n",
" <iframe src=\"https://hekstra-lab.github.io/reciprocalspaceship/data/anomdiff/anomdiff.html#zoom=25\", width=600, height=600></iframe>\n",
" <iframe src=\"https://rs-station.github.io/reciprocalspaceship/data/anomdiff/anomdiff.html#zoom=25\", width=600, height=600></iframe>\n",
" <br>Anomalous difference map from HEWL crystal overlayed with refined model (PDB: 7L84). Map is contoured at +5&sigma;.\n",
"</center>\n"
],
Expand All @@ -950,17 +950,10 @@
"source": [
"%%html\n",
"<center>\n",
" <iframe src=\"https://hekstra-lab.github.io/reciprocalspaceship/data/anomdiff/anomdiff.html#zoom=25\", width=600, height=600></iframe>\n",
" <iframe src=\"https://rs-station.github.io/reciprocalspaceship/data/anomdiff/anomdiff.html#zoom=25\", width=600, height=600></iframe>\n",
" <br>Anomalous difference map from HEWL crystal overlayed with refined model (PDB: 7L84). Map is contoured at +5&sigma;.\n",
"</center>"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
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19 changes: 9 additions & 10 deletions docs/examples/6_timeresolvedPYP.ipynb

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