Scripts used for the preprocessing and analysis of all data from the paper titled "Stabilising selection causes grossly altered but stable karyotypes in metastatic colorectal cancer"
Authors William Cross*, Maximilian Mossner*, Salpie Nowinski*, George Cresswell*, Abhirup Banerjee*, Marc Williams*, Laura Gay*, Ann-Marie Baker*, Christopher Kimberley, Hayley Davis, Pierre Martinez, Maria Traki, Viola Walther, Kane Smith, Giulio Caravagna, Sasikumar Amarasingen, George Elia, Alison Berner, Ryan Changho Choi1, Jamie Murphy, Anthony Antoniou, Susan Clark, Jo-Anne Chin Aleong, Enric Domingo, Inmaculada Spiteri, Nik Matthews, Stuart AC McDonald, Darryl Shibata, Miangela M Lacle, Lai Mun Wang, Morgan Moorghen, Ian PM Tomlinson, Marco Novelli, Marnix Jansen, Alan Watson, Nicholas A Wright, John Bridgewater, Manuel Rodriguez-Justo, Hemant Kocher, Simon J Leedham, Andrea Sottoriva^, Trevor A Graham^
- These authors contributed equally to this manuscript. ^ For correspondence: [email protected] and [email protected]
Data used in the analyses (except for publicly available TCGA datasets, indicated in script placeholders) can be accessed at European Genome-phenome Archive (EGA) Study number EGA
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Figure 1: Figure 2: Figure 3: Figure 4: