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23 Open 32 Closed
23 Open 32 Closed
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Issues list

Feat: get filter options from annotation header enhancement New feature or request
#55 opened Jan 20, 2025 by berntpopp
@berntpopp
Feat: installation or preset for conda/mamba enhancement New feature or request
#54 opened Jan 20, 2025 by berntpopp
@berntpopp
Feat: docker version enhancement New feature or request
#53 opened Jan 20, 2025 by berntpopp
@berntpopp
Feat(annotation): Add annotation for same amino acid position pathogenic enhancement New feature or request
#52 opened Jan 20, 2025 by berntpopp
@berntpopp
Bug: "|" not considered in genotype replacement, should be adapted in replacer.py bug Something isn't working
#51 opened Jan 20, 2025 by berntpopp
@berntpopp
Bug(report): html output not working correctly with a lot of rows enhancement New feature or request
#50 opened Jan 20, 2025 by berntpopp
@berntpopp
refactor: add time to log messages enhancement New feature or request
#49 opened Jan 8, 2025 by berntpopp
@berntpopp
feat: add parallelisation by splitting gene list enhancement New feature or request
#48 opened Jan 8, 2025 by berntpopp
@berntpopp
feat: add annotation hg38 liftover enhancement New feature or request
#47 opened Jan 8, 2025 by berntpopp
@berntpopp
refactor: remove unused function: set_log_level refactor
#46 opened Jan 8, 2025 by berntpopp
@berntpopp
feat: add logic and handling to gzip intermediate files like tsv enhancement New feature or request refactor
#42 opened Jan 7, 2025 by berntpopp
@berntpopp
feat: handle ./1 genotypes enhancement New feature or request
#38 opened Jan 6, 2025 by berntpopp
@berntpopp
docs: add annotation recommendations, scripts, and examples documentation Improvements or additions to documentation
#36 opened Jan 3, 2025 by berntpopp
@berntpopp
feat: add tumor filter for sample genotype combinations enhancement New feature or request
#35 opened Jan 3, 2025 by berntpopp
@berntpopp
feat: add function to pseudomize samples in output enhancement New feature or request
#34 opened Jan 2, 2025 by berntpopp
@berntpopp
feat: find a solution for genotype-filter comp_het with split-snpeff-lines but no transcript filtering enhancement New feature or request
#33 opened Jan 2, 2025 by berntpopp
@berntpopp
bug: odds_ratio inf and 0 have no or_ci_lower or_ci_upper bug Something isn't working
#31 opened Dec 19, 2024 by berntpopp
@berntpopp
test: add test datasets (VCF, BAM) enhancement New feature or request
#28 opened Dec 17, 2024 by berntpopp
@berntpopp
1
chore: add logo to the tool enhancement New feature or request
#27 opened Dec 17, 2024 by berntpopp
@berntpopp
feat: integrate IGV reports links into HTML and XLSX outputs enhancement New feature or request
#26 opened Dec 17, 2024 by berntpopp
@berntpopp
feat: add option to archive results folder enhancement New feature or request
#25 opened Dec 17, 2024 by berntpopp
@berntpopp
feat: make stats computation configurable enhancement New feature or request
#24 opened Dec 17, 2024 by berntpopp
@berntpopp
test: expand test coverage across modules and handle edge cases enhancement New feature or request
#11 opened Dec 13, 2024 by berntpopp
@berntpopp
ProTip! What’s not been updated in a month: updated:<2025-01-05.