update minimum python and build against numpy 2.0

.github/workflows/test_with_conda.yml

@@ -28,14 +28,12 @@ jobs:
         environment-name: geoana-test
         create-args: >-
           python=${{ matrix.python-version }}
-          numpy>=1.20
+          numpy>=2.0.0rc1
           scipy>=1.8
           libdlf
-          cython
+          cython>=3.0.8
           setuptools_scm
-          meson-python>=0.14.0
-          meson
-          ninja
+          meson-python>=0.15.0
           build
           discretize
           matplotlib

.gitignore

@@ -106,3 +106,5 @@ geoana/kernels/_extensions/potential_field_prism_api.h
 
 # setuptools_scm
 geoana/version.py
+
+.idea/

geoana/kernels/_extensions/meson.build

@@ -1,38 +1,7 @@
+
 # NumPy include directory
-# The try-except is needed because when things are
-# split across drives on Windows, there is no relative path and an exception
-# gets raised. There may be other such cases, so add a catch-all and switch to
-# an absolute path. Relative paths are needed when for example a virtualenv is
-# placed inside the source tree; Meson rejects absolute paths to places inside
-# the source tree.
-# For cross-compilation it is often not possible to run the Python interpreter
-# in order to retrieve numpy's include directory. It can be specified in the
-# cross file instead:
-#   [properties]
-#   numpy-include-dir = /abspath/to/host-pythons/site-packages/numpy/core/include
-#
-# This uses the path as is, and avoids running the interpreter.
-incdir_numpy = meson.get_external_property('numpy-include-dir', 'not-given')
-if incdir_numpy == 'not-given'
-  incdir_numpy = run_command(py,
-    [
-      '-c',
-      '''import os
-import numpy as np
-try:
-  incdir = os.path.relpath(np.get_include())
-except Exception:
-  incdir = np.get_include()
-print(incdir)
-  '''
-    ],
-    check: true
-  ).stdout().strip()
-else
-  _incdir_numpy_abs = incdir_numpy
-endif
-inc_np = include_directories(incdir_numpy)
-np_dep = declare_dependency(include_directories: inc_np)
+np_dep = dependency('numpy')
+numpy_nodepr_api = ['-DNPY_NO_DEPRECATED_API=NPY_1_9_API_VERSION']
 
 # Deal with M_PI & friends; add `use_math_defines` to c_args or cpp_args
 # Cython doesn't always get this right itself (see, e.g., gh-16800), so
@@ -44,7 +13,6 @@ else
   use_math_defines = []
 endif
 
-numpy_nodepr_api = '-DNPY_NO_DEPRECATED_API=NPY_1_9_API_VERSION'
 c_undefined_ok = ['-Wno-maybe-uninitialized']
 
 cython_c_args = [numpy_nodepr_api, use_math_defines]

pyproject.toml

@@ -2,21 +2,18 @@
 [build-system]
 build-backend = 'mesonpy'
 requires = [
-    "meson-python>=0.14.0",
-    "Cython>=0.29.35",  # when updating version, also update check in meson.build
+    "meson-python>=0.15.0",
+    "Cython>=3.0.8",
     "setuptools_scm[toml]>=6.2",
-
-    # This package automatically provides all of the numpy pinning for different python
-    # versions and runtime requirements.
-    "oldest-supported-numpy",
+    "numpy>=2.0.0rc1",
 ]
 
 [project]
 name = 'geoana'
 dynamic = ["version"]
 description = 'Analytic expressions for geophysical responses'
 readme = 'README.rst'
-requires-python = '>=3.8'
+requires-python = '>=3.10'
 authors = [
   {name = 'SimPEG developers', email = '[email protected]'},
 ]
@@ -28,8 +25,6 @@ keywords = [
 # release branches, see:
 #     https://scipy.github.io/devdocs/dev/core-dev/index.html#version-ranges-for-numpy-and-other-dependencies
 dependencies = [
-    # TODO: update to "pin-compatible" once possible, see
-    # https://github.com/mesonbuild/meson-python/issues/29
     "numpy>=1.22.4",
     "scipy>=1.8",
     "libdlf",
@@ -95,7 +90,7 @@ Repository = 'https://github.com/simpeg/geoana.git'
 # skip building wheels for python 3.6, 3.7, all pypy versions, and specialty linux
 # processors (still does arm builds though).
 # skip windows 32bit
-skip = "cp36-* cp37-* pp* *_ppc64le *_i686 *_s390x *-win32 cp38-musllinux_* *-musllinux_aarch64"
+skip = "cp36-* cp37-* cp38-* cp39-* pp* *_ppc64le *_i686 *_s390x *-win32 cp38-musllinux_* *-musllinux_aarch64"
 build-verbosity = "3"
 
 # test importing geoana to make sure externals are loadable.