Automated deployment to update containers 2024-12-01

singularityhub · Dec 1, 2024 · 4aac3a1 · 4aac3a1
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Showing 14 changed files with 29 additions and 15 deletions.
diff --git a/quay.io/biocontainers/augur/container.yaml b/quay.io/biocontainers/augur/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/augur
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for augur
 latest:
-  26.0.0--pyhdfd78af_0: sha256:4cdc8e34403dcfff494354a749b01b90ed955e51e4552bdc1340ae966f2e4118
+  26.2.0--pyhdfd78af_0: sha256:ad272a0fd64e831c7005cfd976429f1ecd247402c6b572d5fd9f2d60cc7492eb
 tags:
   9.0.0--py_1: sha256:b50216d6d9feda2fa8e54fd976d596c5b58410b98aede1419fe54525203a337b
   13.1.2--pyhdfd78af_0: sha256:d9fb311e25b0bfd52ec109aed76f270d428f7098cdc719d05796132fae3df3db
@@ -23,6 +23,8 @@ tags:
   25.3.0--pyhdfd78af_0: sha256:8d7cf5a248cedc246f8d138da923537a89388dbe818b776d58a58c1bd362ddad
   26.0.0--pyhdfd78af_0: sha256:4cdc8e34403dcfff494354a749b01b90ed955e51e4552bdc1340ae966f2e4118
   25.4.0--pyhdfd78af_0: sha256:1261d689aee0c54a505143ed28ce14e4860ceb8542f57d182cb90b1c3d15251f
+  26.2.0--pyhdfd78af_0: sha256:ad272a0fd64e831c7005cfd976429f1ecd247402c6b572d5fd9f2d60cc7492eb
+  26.1.0--pyhdfd78af_0: sha256:fa5ed0df1ececb5b65ebf31e5c112aea912de153e3a675f73d028b1c5c7f274c
 docker: quay.io/biocontainers/augur
 aliases:
   augur: /usr/local/bin/augur

diff --git a/quay.io/biocontainers/damidseq_pipeline/container.yaml b/quay.io/biocontainers/damidseq_pipeline/container.yaml
@@ -2,10 +2,11 @@ url: https://biocontainers.pro/tools/damidseq_pipeline
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for damidseq_pipeline
 latest:
-  1.5.3--pl5321hdfd78af_0: sha256:74d6aa3665ab09cf628a2a159b509b0ebba889189c8733e40c784dd1a779de65
+  1.6--pl5321hdfd78af_0: sha256:0175847f687372125ec8b64bb1c09b8c18a91d7f4f52b1caa0709c516997be6e
 tags:
   1.4--pl5321hdfd78af_5: sha256:9d79de14d9026b53a3b7b7b586bc4324967c5a0466dbf625d0e6e5e30186444f
   1.5.3--pl5321hdfd78af_0: sha256:74d6aa3665ab09cf628a2a159b509b0ebba889189c8733e40c784dd1a779de65
+  1.6--pl5321hdfd78af_0: sha256:0175847f687372125ec8b64bb1c09b8c18a91d7f4f52b1caa0709c516997be6e
 docker: quay.io/biocontainers/damidseq_pipeline
 aliases:
   damidseq_pipeline: /usr/local/bin/damidseq_pipeline

diff --git a/quay.io/biocontainers/dupsifter/container.yaml b/quay.io/biocontainers/dupsifter/container.yaml
@@ -2,11 +2,12 @@ url: https://biocontainers.pro/tools/dupsifter
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for dupsifter
 latest:
-  1.2.1.20240119--h5efdd21_1: sha256:79a07e54c9ba54d16cafac6a24c5543748b6a19ad197ddb6c048389987d6899c
+  1.3.0.20241113--h5efdd21_0: sha256:52005c70ea670a6bf0346a2dc7c7e3eaffc52fc3e75d3794f1141927d837d63e
 tags:
   1.2.0.20230926--h81da01d_0: sha256:42004beb33f1b6bf83b5401f20f081f22cd6ee12a948531189fc46ae72d375dd
   1.2.1.20240119--h81da01d_0: sha256:b0d1b51c00e6a4895d79c45d98d58ae11903d3f59ba8753162110e58cb3ce514
   1.2.1.20240119--h5efdd21_1: sha256:79a07e54c9ba54d16cafac6a24c5543748b6a19ad197ddb6c048389987d6899c
+  1.3.0.20241113--h5efdd21_0: sha256:52005c70ea670a6bf0346a2dc7c7e3eaffc52fc3e75d3794f1141927d837d63e
 docker: quay.io/biocontainers/dupsifter
 aliases:
   dupsifter: /usr/local/bin/dupsifter
diff --git a/quay.io/biocontainers/fgsv/container.yaml b/quay.io/biocontainers/fgsv/container.yaml
@@ -2,12 +2,13 @@ url: https://biocontainers.pro/tools/fgsv
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for fgsv
 latest:
-  0.2.0--hdfd78af_0: sha256:a0a73d3e5067298390aabc0801e9b0fdbb13b6bdee3c0ab60432c8e324b941f2
+  0.2.1--hdfd78af_0: sha256:dcaaf06580e14ca4100809beb163e52725197b19faa308b130fd24ef4b04d969
 tags:
   0.0.1--hdfd78af_0: sha256:efd75f9d53cf443072f04ac27d502746e139c2b12a77cca728ba65c83995a7d8
   0.0.2--hdfd78af_0: sha256:8c909b2c768ae38e2208108c61aebdd047d5fb54e24d6c199d5442e4dbb48468
   0.1.1--hdfd78af_0: sha256:16e77d00558bbd86f9ef6337f715866b7d1a327375fc1ffda9a9ee34bba46808
   0.2.0--hdfd78af_0: sha256:a0a73d3e5067298390aabc0801e9b0fdbb13b6bdee3c0ab60432c8e324b941f2
+  0.2.1--hdfd78af_0: sha256:dcaaf06580e14ca4100809beb163e52725197b19faa308b130fd24ef4b04d969
 docker: quay.io/biocontainers/fgsv
 aliases:
   fgsv: /usr/local/bin/fgsv

diff --git a/quay.io/biocontainers/gempipe/container.yaml b/quay.io/biocontainers/gempipe/container.yaml
@@ -2,14 +2,15 @@ url: https://biocontainers.pro/tools/gempipe
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for gempipe
 latest:
-  1.37.0--pyhdfd78af_0: sha256:e2f0e80ee3824c17abe2f6e383690d9a423a5d21afa5607fd369fceadb380c54
+  1.37.4--pyhdfd78af_0: sha256:72c753abdef56975100f649cd82f4e4eb122cf0eea64f40d6ec7ead95e6ecd84
 tags:
   1.33.4--pyhdfd78af_0: sha256:d1095e4427fc39b5629de75d05841e1249df041c17af08c8bec8b0361c6eaa7b
   1.34.2--pyhdfd78af_0: sha256:1f1f035b5645727e4c983f792c3a61ed0bcc768d53227d2bc9af94e7caff89b3
   1.35.3--pyhdfd78af_0: sha256:caf1dd7687e098ee35b25c8c9843b3b9b6eb0d20b6674acf612fa8d1544638ab
   1.37.0--pyhdfd78af_0: sha256:e2f0e80ee3824c17abe2f6e383690d9a423a5d21afa5607fd369fceadb380c54
   1.36.0--pyhdfd78af_0: sha256:90ca61bb1737255ba1f2537966711e7809db529d53c287394b89d9efe09fd428
   1.35.5--pyhdfd78af_0: sha256:4ee4efd02a4fa6b74efce6245e662fa78e90418a5b328b5d668a0e803475df16
+  1.37.4--pyhdfd78af_0: sha256:72c753abdef56975100f649cd82f4e4eb122cf0eea64f40d6ec7ead95e6ecd84
 docker: quay.io/biocontainers/gempipe
 aliases:
   PF00225_full.blocks.txt: /usr/local/bin/PF00225_full.blocks.txt

diff --git a/quay.io/biocontainers/hmftools-redux/container.yaml b/quay.io/biocontainers/hmftools-redux/container.yaml
@@ -2,10 +2,11 @@ url: https://biocontainers.pro/tools/hmftools-redux
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for hmftools-redux
 latest:
-  1.0_beta--hdfd78af_2: sha256:bc04457a9957c2d9f07e4de2209114062341ec65a98b7370c70bd400abedd994
+  1.0_beta--hdfd78af_6: sha256:4f06df9cfd9c1cce87c7c3c6add99b9e99a68f05e64d4c36865aab90efa11de6
 tags:
   1.0_beta--hdfd78af_0: sha256:cd8b9582cdc782c83332b0d4b4c532f617c41d19d0725426413de301cd5da6ed
   1.0_beta--hdfd78af_2: sha256:bc04457a9957c2d9f07e4de2209114062341ec65a98b7370c70bd400abedd994
+  1.0_beta--hdfd78af_6: sha256:4f06df9cfd9c1cce87c7c3c6add99b9e99a68f05e64d4c36865aab90efa11de6
 docker: quay.io/biocontainers/hmftools-redux
 aliases:
   redux: /usr/local/bin/redux

diff --git a/quay.io/biocontainers/hybracter/container.yaml b/quay.io/biocontainers/hybracter/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/hybracter
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for hybracter
 latest:
-  0.10.0--pyhdfd78af_0: sha256:b4871bc64c66b60074e7de4e61c22601bb8358402919381eeb09f99e8cee4734
+  0.10.1--pyhdfd78af_0: sha256:0ab00427d66d4e60061f6d3fed051b30fa29953779105f7b3d4ebcd4b3cfb5dc
 tags:
   0.1.2--pyhdfd78af_0: sha256:980cfcbbad71ce1742a56685146167b3b32b3df12e14d8a05d5346eb0a5a2c12
   0.2.1--pyhdfd78af_0: sha256:b76818af984f2d2c1795b9a6e62ff32a02eb88dbbd345f2e191f56e3b463f8ea
@@ -16,6 +16,7 @@ tags:
   0.8.0--pyhdfd78af_0: sha256:5a2d53d75454b9cc87e04618833bf85b43241fb1c99b4cd64a964def89eb6cc6
   0.10.0--pyhdfd78af_0: sha256:b4871bc64c66b60074e7de4e61c22601bb8358402919381eeb09f99e8cee4734
   0.9.1--pyhdfd78af_0: sha256:bd5069f8a8bbebe689f29f17568441fc7f77977e9e30c344ddd14069524465ff
+  0.10.1--pyhdfd78af_0: sha256:0ab00427d66d4e60061f6d3fed051b30fa29953779105f7b3d4ebcd4b3cfb5dc
 docker: quay.io/biocontainers/hybracter
 aliases:
   hybracter: /usr/local/bin/hybracter

diff --git a/quay.io/biocontainers/hyphy/container.yaml b/quay.io/biocontainers/hyphy/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/hyphy
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for hyphy
 latest:
-  2.5.63--h0d74fca_0: sha256:89c67de33a8e24b2d2edf699b6be04b3698801a58de30f90d63d239cafb05271
+  2.5.64--h0d74fca_0: sha256:a6f042beaa98b21ac60c09026099c6b69b2b12631621747254ce2f021eed3fa9
 tags:
   2.5.9--ha076c6e_0: sha256:a84936a03479d9782d991344e44db9539804065e04d9c6850ae911c068b723d3
   2.5.38--h91ae1e9_0: sha256:9f943f4c5c10e4017da77ede652df4b920858fcdc9926a077b426b4fbad18d2a
@@ -11,4 +11,5 @@ tags:
   2.5.62--h0705fce_0: sha256:30c12f7c985c372db8296c8eba88e27ecdd98bf7c07da23210265cd379128e41
   2.5.62--h0d74fca_1: sha256:c1334ec0cb099fd3eeadd070a4bebe90d89d9e9ba9dcbebdff85013fc6403a07
   2.5.63--h0d74fca_0: sha256:89c67de33a8e24b2d2edf699b6be04b3698801a58de30f90d63d239cafb05271
+  2.5.64--h0d74fca_0: sha256:a6f042beaa98b21ac60c09026099c6b69b2b12631621747254ce2f021eed3fa9
 docker: quay.io/biocontainers/hyphy
diff --git a/quay.io/biocontainers/lsabgc/container.yaml b/quay.io/biocontainers/lsabgc/container.yaml
@@ -2,11 +2,12 @@ url: https://biocontainers.pro/tools/lsabgc
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for lsabgc
 latest:
-  1.1.2--pyh7e72e81_0: sha256:22eafb773c9634bdf54ff6867eac7c86bdf41b358f3d548ac7110d5f2459b535
+  1.1.2--pyh7e72e81_1: sha256:960ec8c89716370022665f03f56f6d103c952d02af73d71ecb54bc7cfc7c7ac4
 tags:
   1.0.5--pyh7e72e81_0: sha256:59344015d94d3d2475aa5912131dcc3a8af2dbaee765b47db964e902383d9ff9
   1.1.2--pyh7e72e81_0: sha256:22eafb773c9634bdf54ff6867eac7c86bdf41b358f3d548ac7110d5f2459b535
   1.0.9--pyh7e72e81_0: sha256:ab311548f45f1c2381058ed7a892ba3d7e561a10f110f3ce8845a8a3432ed130
+  1.1.2--pyh7e72e81_1: sha256:960ec8c89716370022665f03f56f6d103c952d02af73d71ecb54bc7cfc7c7ac4
 docker: quay.io/biocontainers/lsabgc
 aliases:
   GSeeF: /usr/local/bin/GSeeF

diff --git a/quay.io/biocontainers/matchms/container.yaml b/quay.io/biocontainers/matchms/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/matchms
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for matchms
 latest:
-  0.27.0--pyhdfd78af_1: sha256:30272c2c5b4d42fecf0bdc20b02f868b6ab212df702d7e010691a808c6261de9
+  0.28.2--pyhdfd78af_0: sha256:89b6a7250616af0decf0d99c6134da00f92e392bcb6c573cc10e323d16b1e281
 tags:
   0.9.2--pyh5e36f6f_0: sha256:d1a8f1d785b8993724305e4684caae5bc194b9fbb99053883eacfead753f20c0
   0.17.0--pyh7cba7a3_0: sha256:e627c7edc52623413aaaa9a8e0d5ab36745a674a134fc9068ebfca9c2b64fef4
@@ -25,6 +25,7 @@ tags:
   0.26.4--pyhdfd78af_0: sha256:5de845971b5f9c9f74182675541c2e6e0fc98356136a60cc264bf5fe87febdd1
   0.27.0--pyhdfd78af_0: sha256:25e08859755994ce8d476bdd6c8c39907ae31d00ee076041f33efeb22ae59913
   0.27.0--pyhdfd78af_1: sha256:30272c2c5b4d42fecf0bdc20b02f868b6ab212df702d7e010691a808c6261de9
+  0.28.2--pyhdfd78af_0: sha256:89b6a7250616af0decf0d99c6134da00f92e392bcb6c573cc10e323d16b1e281
 docker: quay.io/biocontainers/matchms
 aliases:
   numba: /usr/local/bin/numba

diff --git a/quay.io/biocontainers/notramp/container.yaml b/quay.io/biocontainers/notramp/container.yaml
@@ -2,9 +2,10 @@ url: https://biocontainers.pro/tools/notramp
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for notramp
 latest:
-  1.0.5--pyh5e36f6f_0: sha256:948e2fa68132c6147a680b79cd4023b28cf0bab39a2534d83e2500c6aeff1607
+  1.1.7--pyh7e72e81_0: sha256:1bb7762ee5ea6876989d09849f3fadef327d08df05b807c35a9806ecb10fead4
 tags:
   1.0.5--pyh5e36f6f_0: sha256:948e2fa68132c6147a680b79cd4023b28cf0bab39a2534d83e2500c6aeff1607
+  1.1.7--pyh7e72e81_0: sha256:1bb7762ee5ea6876989d09849f3fadef327d08df05b807c35a9806ecb10fead4
 docker: quay.io/biocontainers/notramp
 aliases:
   notramp: /usr/local/bin/notramp

diff --git a/quay.io/biocontainers/perl-json-parse/container.yaml b/quay.io/biocontainers/perl-json-parse/container.yaml
@@ -2,10 +2,11 @@ url: https://biocontainers.pro/tools/perl-json-parse
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for perl-json-parse
 latest:
-  0.62--pl5321h4ac6f70_3: sha256:47f5fdcbf0877dc6a8753ea3d9cc8b50bb5d1bc2b2f620bab552c6cf2e448ecb
+  0.62--pl5321h4ac6f70_4: sha256:ee1be28f7b10059a5c4397e86c7085677ca24ba6038819bc0042c39ce425c512
 tags:
   0.62--pl5321h9f5acd7_1: sha256:8562e88fa7afe8c3380586c52352d86292bcf99b9cd15f01eaf915f749da0950
   0.62--pl5321h4ac6f70_3: sha256:47f5fdcbf0877dc6a8753ea3d9cc8b50bb5d1bc2b2f620bab552c6cf2e448ecb
+  0.62--pl5321h4ac6f70_4: sha256:ee1be28f7b10059a5c4397e86c7085677ca24ba6038819bc0042c39ce425c512
 docker: quay.io/biocontainers/perl-json-parse
 aliases:
   validjson: /usr/local/bin/validjson

diff --git a/quay.io/biocontainers/snk/container.yaml b/quay.io/biocontainers/snk/container.yaml
@@ -2,9 +2,10 @@ url: https://biocontainers.pro/tools/snk
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for snk
 latest:
-  0.30.1--pyhdfd78af_0: sha256:caba8e53725c2c2c004db2281e44428504ce5ad0407482cf24e3c9d1a69e953d
+  0.31.0--pyhdfd78af_0: sha256:0b37c7619af6483b456680465eef006a98ded4dc052be97209e87a56ef8ebc62
 tags:
   0.30.1--pyhdfd78af_0: sha256:caba8e53725c2c2c004db2281e44428504ce5ad0407482cf24e3c9d1a69e953d
+  0.31.0--pyhdfd78af_0: sha256:0b37c7619af6483b456680465eef006a98ded4dc052be97209e87a56ef8ebc62
 docker: quay.io/biocontainers/snk
 aliases:
   art: /usr/local/bin/art

diff --git a/rocker/shiny/container.yaml b/rocker/shiny/container.yaml
@@ -3,7 +3,7 @@ url: https://hub.docker.com/r/rocker/shiny
 maintainer: '@vsoch'
 description: Docker image with R + Shiny.
 latest:
-  4.4.2: sha256:eefe133eb2c1e5c57219d8e1ecf271441bd8f19a966674f5458513ff492bf86d
+  4.4.2: sha256:d47ead72a87499d612d5c9cef388ae8840651efc55678c7cc30f80507d7a379c
 tags:
   4.2.2: sha256:5a01f59096c1b86e283cf9756d8badf8f1760a565b82b0c02112f7ffabb81b8b
   3.6.3: sha256:212182dd244edd0380f2f76521f2c10405504b632696852d776402585eb68625
@@ -16,7 +16,7 @@ tags:
   4.3.3: sha256:2552384e06381be996df2cd2d72020bf1c997e929d55e2826a9f9cfbe8d5dc69
   4.4.0: sha256:a76bfc201e36b5da0727d99737a2e7bf0d9df56e812c6fb08774c59f17dac048
   4.4.1: sha256:c50810df4747090eceb2f94da767ad27ad92dc78f96440577cfb8dbe46431026
-  4.4.2: sha256:eefe133eb2c1e5c57219d8e1ecf271441bd8f19a966674f5458513ff492bf86d
+  4.4.2: sha256:d47ead72a87499d612d5c9cef388ae8840651efc55678c7cc30f80507d7a379c
 filter:
 - ^[0-9]+[.][0-9]+[.][0-9]+$
 aliases: