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snakefmt
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tdayris committed May 22, 2024
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Expand Up @@ -8,6 +8,8 @@ Gustave Roussy computing cluster (Flamingo) reports:
for grch38
"""


rule fair_genome_indexer_pyfaidx_filter_out_noncanonical_chromosomes:
input:
fasta="tmp/fair_genome_indexer_get_genome_fasta_sequence/{species}.{build}.{release}.{datatype}.fasta",
Expand Down Expand Up @@ -49,6 +51,8 @@ Gustave Roussy computing cluster (Flamingo) reports:
for grch38
"""


rule fair_genome_indexer_rsync_make_fasta_available:
input:
branch(
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