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A patch which - hopefully only temporarily, while adephylo is fixed - removes "Abouheif" and "sumDD" as available metrics in the function treespace.
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Package: treespace | ||
Title: Statistical Exploration of Landscapes of Phylogenetic Trees | ||
Date: 2023-04-03 | ||
Version: 1.1.4.2 | ||
Date: 2023-09-07 | ||
Version: 1.1.4.3 | ||
Authors@R: c(TJ = person("Thibaut", "Jombart", email="[email protected]", role = "aut", comment = c(ORCID = "0000-0003-2226-8692")), | ||
MK = person("Michelle", "Kendall", email="[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-7344-7071")), | ||
JAG = person("Jacob", "Almagro-Garcia", role = "aut", comment = c(ORCID = "0000-0002-0595-7333")), | ||
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@@ -11,12 +11,12 @@ Description: Tools for the exploration of distributions of phylogenetic trees. | |
treespaceServer(). | ||
For further details see Jombart et al. (2017) <DOI:10.1111/1755-0998.12676>. | ||
Depends: R (>= 3.4.0), ape, ade4 | ||
Imports: adegenet, adegraphics, adephylo, combinat, compiler, distory, | ||
Imports: adegenet, adegraphics, combinat, compiler, distory, | ||
fields, htmlwidgets, MASS, methods, parallel, phangorn, phytools, Rcpp, | ||
rgl, RLumShiny, scatterD3, shiny, shinyBS, utils | ||
LinkingTo: Rcpp | ||
Suggests: ggplot2, igraph, knitr, pander, RColorBrewer, reshape2, | ||
rmarkdown, testthat | ||
rmarkdown, sf, testthat | ||
License: MIT + file LICENSE | ||
Encoding: UTF-8 | ||
LazyData: true | ||
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