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feat: add vector and graph dbs state to README file #235

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merged 3 commits into from
Nov 18, 2024

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borisarzentar
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@borisarzentar borisarzentar commented Nov 18, 2024

Summary by CodeRabbit

  • New Features

    • Updated configuration options for database providers in the environment template.
    • Introduced a new section in the README detailing the implementation state of various database options.
  • Documentation

    • Enhanced clarity and organization in the README, including streamlined installation instructions and expanded usage guidelines.
    • Corrected file path in the example usage section for accuracy.
  • Chores

    • Removed optional setup instruction from example comments to simplify the setup process.

@borisarzentar borisarzentar self-assigned this Nov 18, 2024
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coderabbitai bot commented Nov 18, 2024

Walkthrough

The changes in this pull request involve updates to configuration variables in the .env.template file, specifically changing the database providers to networkx for graph databases and lancedb for vector databases. Additionally, the README.md file has been restructured for clarity, including updated installation instructions and a new section on database implementation states. Lastly, a comment in the example Python script has been removed to streamline setup instructions.

Changes

File Change Summary
.env.template Updated GRAPH_DATABASE_PROVIDER from "neo4j" to "networkx"; updated VECTOR_DB_PROVIDER from "qdrant" to "lancedb".
README.md Adjusted section headers, streamlined installation instructions, expanded usage instructions, corrected file path in examples, and added a new section on database implementation states. Minor formatting adjustments made.
examples/python/simple_example.py Removed optional setup instruction comment regarding VECTOR_DB_PROVIDER.

Possibly related PRs

Suggested reviewers

  • Vasilije1990
  • dexters1

🐇 In the garden, changes bloom bright,
From Neo4j to NetworkX, a new light.
LanceDB joins the vector's dance,
With clearer README, we take a chance.
Hop along, let’s code and play,
In Cognee's world, we find our way! 🌼


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@borisarzentar
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I am setting LanceDB and NetworkX to be default in template env file because that is "no setup" configuration.

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Looks good to me!

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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (6)
.env.template (2)

11-15: LGTM! Consider adding a comment about NetworkX's in-memory nature.

The change to NetworkX as default aligns well with the "no setup" goal. However, it would be helpful to add a brief comment about NetworkX being an in-memory graph database, which means data won't persist between restarts.

 # "neo4j" or "networkx"
-GRAPH_DATABASE_PROVIDER="networkx"
+# Note: NetworkX is an in-memory database - data won't persist between restarts
+GRAPH_DATABASE_PROVIDER="networkx"

Line range hint 1-33: Consider adding a header comment to clarify database relationships.

The template file contains configurations for three different types of databases (graph, vector, and relational). Consider adding a header comment explaining their relationships and when each is needed.

+# Database Configuration
+# This template configures three database types:
+# 1. Graph Database: For storing graph relationships (NetworkX = in-memory, Neo4j = persistent)
+# 2. Vector Database: For storing embeddings (LanceDB = file-based, others = client-server)
+# 3. Relational Database: For storing metadata and other structured data
+
 ENV="local"
README.md (4)

98-99: Clarify default database configuration in setup instructions

Since LanceDB and NetworkX are now the default database providers, it would be helpful to explicitly mention this in the setup instructions. Consider adding:

First, copy `.env.template` to `.env` and add your OpenAI API key to the LLM_API_KEY field.
+ By default, the template is configured to use LanceDB (vector database) and NetworkX (graph database) which require no additional setup.

Line range hint 239-246: Add instructions for configuring different database providers

While the documentation mentions support for multiple vector and graph stores, it doesn't explain how to switch between them. Consider adding configuration examples for each supported database provider, similar to the PostgreSQL example above.

🧰 Tools
🪛 LanguageTool

[locale-violation] ~16-~16: In American English, “take a look” is more commonly used.
Context: ...C4TYvEvWZ?usp=sharing">notebook or have a look at our <a href="https://topoteretes.git...

(HAVE_A_LOOK)


286-291: Remove unnecessary styling block

The <style> block is not needed as GitHub Markdown automatically handles table formatting. Consider removing these lines for better maintainability.


294-300: Improve database status documentation

A few suggestions to enhance the database status table:

  1. Consider using Markdown emojis (:white_check_mark: and :x:) instead of HTML entities for better compatibility
  2. Add known issues or limitations for FalkorDB to help users understand why it's marked as unstable
  3. For PGVector, consider adding a workaround or mitigation for the timeout error

Example improvement:

- | Qdrant           | Vector             | Stable &#x2705;   |                                       |
+ | Qdrant           | Vector             | Stable :white_check_mark: |                               |
- | FalkorDB         | Vector/Graph       | Unstable &#x274C; |                                       |
+ | FalkorDB         | Vector/Graph       | Unstable :x:      | [List specific stability issues]      |
📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between ced5385 and a7c68ea.

📒 Files selected for processing (3)
  • .env.template (1 hunks)
  • README.md (6 hunks)
  • examples/python/simple_example.py (0 hunks)
💤 Files with no reviewable changes (1)
  • examples/python/simple_example.py
🔇 Additional comments (1)
.env.template (1)

18-21: Verify LanceDB's persistence configuration requirements.

The change to LanceDB as default aligns with the "no setup" goal. However, we should verify if any additional configuration is needed for data persistence.

✅ Verification successful

Based on the search results, I can generate the final response as I have sufficient information about LanceDB's configuration and persistence behavior:

LanceDB persistence is automatically handled with default configuration

LanceDB data is automatically persisted to .cognee_system/databases/cognee.lancedb directory without requiring any additional configuration. The comment in .env.template is accurate - no URL or API key is needed when using LanceDB.

  • Configuration is handled in cognee/api/v1/config/config.py which sets up the storage path
  • Data persistence is managed through the local filesystem at the configured path
  • The implementation in cognee/infrastructure/databases/vector/lancedb/LanceDBAdapter.py confirms this behavior
🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Search for LanceDB configuration patterns in the codebase
echo "Searching for LanceDB configuration patterns..."
rg -i "lancedb" -A 5 -B 5

# Look for any persistence-related configuration
echo "Checking for persistence configuration..."
rg -i "persist|storage|path.*lancedb"

Length of output: 28362

@borisarzentar borisarzentar merged commit c045f73 into main Nov 18, 2024
14 checks passed
@borisarzentar borisarzentar deleted the feat/COG-489-document-vector-and-graph-db-state branch November 18, 2024 16:51
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3 participants