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Fix windows builds #1306

Fix windows builds

Fix windows builds #1306

Workflow file for this run

name: CI
on:
push:
branches:
- "main"
pull_request:
branches:
- "main"
schedule:
- cron: "0 0 * * 0" # Run every Sunday at 0:00
jobs:
test:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest", "macos-latest", "macos-13", "windows-2019"]
python-version: ["3.10"] #, "3.9", "3.11", "3.12"]
defaults: # Needed for conda
run:
shell: bash -l {0}
steps:
- name: Check out
uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
python-version: ${{ matrix.python-version }}
channels: conda-forge,defaults
- name: Install OS-specific conda dependencies
run: |
if [[ "${{ runner.os }}" == "Linux" ]]; then
conda install --file conda_deps_linux.txt
elif [[ "${{ runner.os }}" == "macOS" ]]; then
conda install --file conda_deps_osx.txt
elif [[ "${{ runner.os }}" == "Windows" ]]; then
conda install --file conda_deps_win.txt
fi
- name: Install testing packages
run: conda install -y -c conda-forge flake8 pytest psutil
- name: Build and install the package
run: pip -vv install .
- name: List the conda environment
run: conda list
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Run tests
run: pytest -v -s
- name: Test torchmd-train utility
run: torchmd-train --help