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Merge pull request #63 from uclahs-cds/nwiltsie-add-requirements
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Add requirements to README
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nwiltsie authored Apr 5, 2024
2 parents 99d0e8c + 7c39c90 commit cd8c2a1
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -21,6 +21,7 @@ This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.htm
- Output pipeline parameters to log directory using `store_object_as_json`
- Add Action to deploy documentation to GitHub Pages
- Add Nextflow configuration test action and two regression tests
- Add requirements to README

### [Changed]
- Use modularized `set_env` function
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2 changes: 2 additions & 0 deletions README.md
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Expand Up @@ -18,6 +18,8 @@ This pipeline takes BAMs and corresponding indices from [pipeline-align-DNA](htt

## How To Run

**Requirements**: Currently supported Nextflow versions: `23.04.2`

**The pipeline is currently configured to run on a SINGLE NODE mode with normal only, tumor only, normal-tumor paired, or multiple normal and tumor samples.**

1. Update the params section of the .config file ([Example config](config/template.config)).
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