Code

Allow input of recalibration tables#45

Code

Merged

yashpatel6 merged 9 commits intomainuclahs-cds/pipeline-recalibrate-BAM:mainfrom yashpatel-use-recal-tableuclahs-cds/pipeline-recalibrate-BAM:yashpatel-use-recal-tableCopy head branch name to clipboardDec 21, 2023

+101-63

Commits

Commits on Dec 19, 2023

• Add example YAMLs for using recalibration tables

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  3f1e61b

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• Add recalibration tables input to schema

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  8f5da04

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• Add type for list of recalibration tables

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  8a551e6

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• Add handler for recalibration tables and use modularized set_env function

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  bcd3ceb

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• Add recal tables to log info

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  b184cfb

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• Add check to skip recalibration table generation if table exists for sample

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  95b148d

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• Update CHANGELOG

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• Add recalibration table input option to README

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Commits on Dec 20, 2023

• Use singular form for recalibration_table

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