ci: Add CI for python build and test #3
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| name: CI Python | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - dev | |
| pull_request: | |
| permissions: | |
| contents: read | |
| env: | |
| PYTHON_PATH: ./py-phylo2vec | |
| jobs: | |
| linux: | |
| runs-on: ${{ matrix.platform.runner }} | |
| strategy: | |
| matrix: | |
| platform: | |
| - runner: ubuntu-latest | |
| target: x86_64 | |
| - runner: ubuntu-latest | |
| target: x86 | |
| - runner: ubuntu-latest | |
| target: aarch64 | |
| - runner: ubuntu-latest | |
| target: armv7 | |
| - runner: ubuntu-latest | |
| target: s390x | |
| - runner: ubuntu-latest | |
| target: ppc64le | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.x | |
| - name: Build wheels | |
| uses: PyO3/maturin-action@v1 | |
| with: | |
| target: ${{ matrix.platform.target }} | |
| args: --release --out dist --manifest-path ${{ env.PYTHON_PATH }}/Cargo.toml | |
| sccache: 'true' | |
| manylinux: auto | |
| - name: pytest | |
| if: ${{ startsWith(matrix.platform.target, 'x86_64') }} | |
| shell: bash | |
| run: | | |
| set -e | |
| python3 -m venv .venv | |
| source .venv/bin/activate | |
| pip install phylo2vec --find-links ${{ env.PYTHON_PATH }}/dist --force-reinstall | |
| pip install pytest | |
| pytest | |
| - name: pytest | |
| if: ${{ !startsWith(matrix.platform.target, 'x86') && matrix.platform.target != 'ppc64' }} | |
| uses: uraimo/run-on-arch-action@v2 | |
| with: | |
| arch: ${{ matrix.platform.target }} | |
| distro: ubuntu22.04 | |
| githubToken: ${{ github.token }} | |
| install: | | |
| apt-get update | |
| apt-get install -y --no-install-recommends python3 python3-pip | |
| pip3 install -U pip pytest | |
| run: | | |
| set -e | |
| pip3 install phylo2vec --find-links ${{ env.PYTHON_PATH }}/dist --force-reinstall | |
| pytest | |
| musllinux: | |
| runs-on: ${{ matrix.platform.runner }} | |
| strategy: | |
| matrix: | |
| platform: | |
| - runner: ubuntu-latest | |
| target: x86_64 | |
| - runner: ubuntu-latest | |
| target: x86 | |
| - runner: ubuntu-latest | |
| target: aarch64 | |
| - runner: ubuntu-latest | |
| target: armv7 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.x | |
| - name: Build wheels | |
| uses: PyO3/maturin-action@v1 | |
| with: | |
| target: ${{ matrix.platform.target }} | |
| args: --release --out dist --manifest-path ${{ env.PYTHON_PATH }}/Cargo.toml | |
| sccache: 'true' | |
| manylinux: musllinux_1_2 | |
| - name: pytest | |
| if: ${{ startsWith(matrix.platform.target, 'x86_64') }} | |
| uses: addnab/docker-run-action@v3 | |
| with: | |
| image: alpine:latest | |
| options: -v ${{ github.workspace }}:/io -w /io | |
| run: | | |
| set -e | |
| apk add py3-pip py3-virtualenv | |
| python3 -m virtualenv .venv | |
| source .venv/bin/activate | |
| pip install phylo2vec --no-index --find-links ${{ env.PYTHON_PATH }}/dist --force-reinstall | |
| pip install pytest | |
| pytest | |
| - name: pytest | |
| if: ${{ !startsWith(matrix.platform.target, 'x86') }} | |
| uses: uraimo/run-on-arch-action@v2 | |
| with: | |
| arch: ${{ matrix.platform.target }} | |
| distro: alpine_latest | |
| githubToken: ${{ github.token }} | |
| install: | | |
| apk add py3-virtualenv | |
| run: | | |
| set -e | |
| python3 -m virtualenv .venv | |
| source .venv/bin/activate | |
| pip install pytest | |
| pip install phylo2vec --find-links ${{ env.PYTHON_PATH }}/dist --force-reinstall | |
| pytest | |
| windows: | |
| runs-on: ${{ matrix.platform.runner }} | |
| strategy: | |
| matrix: | |
| platform: | |
| - runner: windows-latest | |
| target: x64 | |
| - runner: windows-latest | |
| target: x86 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.x | |
| architecture: ${{ matrix.platform.target }} | |
| - name: Build wheels | |
| uses: PyO3/maturin-action@v1 | |
| with: | |
| target: ${{ matrix.platform.target }} | |
| args: --release --out dist --manifest-path ${{ env.PYTHON_PATH }}/Cargo.toml | |
| sccache: 'true' | |
| - name: pytest | |
| if: ${{ !startsWith(matrix.platform.target, 'aarch64') }} | |
| shell: bash | |
| run: | | |
| set -e | |
| python3 -m venv .venv | |
| source .venv/Scripts/activate | |
| pip install phylo2vec --find-links ${{ env.PYTHON_PATH }}/dist --force-reinstall | |
| pip install pytest | |
| pytest | |
| macos: | |
| runs-on: ${{ matrix.platform.runner }} | |
| strategy: | |
| matrix: | |
| platform: | |
| - runner: macos-14 | |
| target: aarch64 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.x | |
| - name: Build wheels | |
| uses: PyO3/maturin-action@v1 | |
| with: | |
| target: ${{ matrix.platform.target }} | |
| args: --release --out dist --manifest-path ${{ env.PYTHON_PATH }}/Cargo.toml | |
| sccache: 'true' | |
| - name: pytest | |
| run: | | |
| set -e | |
| python3 -m venv .venv | |
| source .venv/bin/activate | |
| pip install phylo2vec --find-links ${{ env.PYTHON_PATH }}/dist --force-reinstall | |
| pip install pytest | |
| pytest |